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Gene Expression Data
Assay Details
Assay
Reference: J:71033 Gavalas A, et al., Synergy between Hoxa1 and Hoxb1: the relationship between arch patterning and the generation of cranial neural crest. Development. 2001 Aug;128(15):3017-27
Assay type: RNA in situ
MGI Accession ID: MGI:2150079
Gene symbol: Hoxa2
Gene name: homeobox A2
Probe: Hoxa2 probe2
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 1G: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: rhombomere 2 Present 1g
TS15: rhombomere 3 Present 1g
TS15: rhombomere 4 Present 1g
TS15: rhombomere 5 Present 1g
TS15: rhombomere 6 Present 1g

Specimen 1H: embryonic day 9.5; Hoxa1tm1Ipc/Hoxa1tm1Ipc (more )
Structure Level Pattern Image Note
TS15: rhombomere 2 Present 1h
TS15: rhombomere 3 Present 1h
TS15: rhombomere 4 Present 1h
TS15: rhombomere 5 Present 1h
TS15: rhombomere 6 Present 1h

Specimen 1J: embryonic day 9.5; Hoxa1tm1Ipc/Hoxa1tm1Ipc, Hoxb1tm1Ipc/Hoxb1tm1Ipc (more )
Structure Level Pattern Image Note
TS15: rhombomere 2 Present 1j
TS15: rhombomere 3 Present 1j
TS15: rhombomere 4 Present 1j
TS15: rhombomere 5 Present 1j
TS15: rhombomere 6 Present 1j

Specimen 2D: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: 2nd branchial arch mesenchyme derived from neural crest Moderate 2d Expression is in a continuous stream from r4 to the distal tip of the arch.
TS15: rhombomere 4 Present 2d

Specimen 2E: embryonic day 9.5; Hoxa1tm1Ipc/Hoxa1tm1Ipc (more )
Structure Level Pattern Image Note
TS15: 2nd branchial arch mesenchyme derived from neural crest Weak Regionally restricted 2e Expression in the mutant is weaker than in wild-type.
TS15: rhombomere 4 Present 2e

Specimen 2F: embryonic day 9.5; Hoxa1tm1Ipc/Hoxa1tm1Ipc, Hoxb1tm1Ipc/Hoxb1tm1Ipc (more )
Structure Level Pattern Image Note
TS15: 2nd branchial arch mesenchyme derived from neural crest Absent 2f
TS15: rhombomere 4 Present 2f


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/07/2024
MGI 6.23
The Jackson Laboratory