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Gene Expression Data
Assay Details
Assay
Reference: J:71033 Gavalas A, et al., Synergy between Hoxa1 and Hoxb1: the relationship between arch patterning and the generation of cranial neural crest. Development. 2001 Aug;128(15):3017-27
Assay type: RNA in situ
MGI Accession ID: MGI:2150071
Gene symbol: Hoxb2
Gene name: homeobox B2
Probe: Hoxb2 probe9
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 1D: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: rhombomere 3 Present 1d
TS15: rhombomere 4 Present 1d
TS15: rhombomere 5 Present 1d
TS15: rhombomere 6 Present 1d
Specimen 1E: embryonic day 9.5; Hoxa1tm1Ipc/Hoxa1tm1Ipc (more )
Structure Level Pattern Image Note
TS15: rhombomere 3 Present 1e
TS15: rhombomere 4 Present 1e
TS15: rhombomere 5 Present 1e
TS15: rhombomere 6 Present 1e
Specimen 1F: embryonic day 9.5; Hoxa1tm1Ipc/Hoxa1tm1Ipc, Hoxb1tm1Ipc/Hoxb1tm1Ipc (more )
Structure Level Pattern Image Note
TS15: rhombomere 3 Present 1f
TS15: rhombomere 5 Present 1f
TS15: rhombomere 6 Present 1f
TS15: rhombomere 4 Absent 1f
Specimen 2A: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: 2nd branchial arch mesenchyme derived from neural crest Moderate Regionally restricted 2a Expression is in a continuous stream of cells from r4 to the distal tip of the second arch.
TS15: migrating neural crest Moderate Regionally restricted 2a Expression is in a continuous stream of cells from r4 to the distal tip of the second arch.
TS15: rhombomere 4 Moderate Regionally restricted 2a Expression is in a continuous stream of cells from r4 to the distal tip of the second arch.
Specimen 2B: embryonic day 9.5; Hoxa1tm1Ipc/Hoxa1tm1Ipc (more )
Structure Level Pattern Image Note
TS15: 2nd branchial arch mesenchyme derived from neural crest Weak Regionally restricted 2b Expression is weaker in both arch mesenchyme and migrating neural crest.
TS15: migrating neural crest Weak Regionally restricted 2b Expression is weaker in both arch mesenchyme and migrating neural crest.
TS15: rhombomere 4 Weak Regionally restricted 2b Expression is weaker in both arch mesenchyme and migrating neural crest.
Specimen 2C: embryonic day 9.5; Hoxa1tm1Ipc/Hoxa1tm1Ipc, Hoxb1tm1Ipc/Hoxb1tm1Ipc (more )
Structure Level Pattern Image Note
TS15: 2nd branchial arch mesenchyme derived from neural crest Absent 2c
TS15: rhombomere 4 Absent 2c
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory