Gene Expression Data
Assay Details
Assay
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Reference:
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J:32272
Gaunt SJ, Mouse homeobox gene transcripts occupy different but overlapping domains in embryonic germ layers and organs: a comparison of Hox-3.1 and Hox-1.5. Development. 1988 May;103(1):135-44
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:1345061
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Gene symbol:
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Hoxa3
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Gene name:
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homeobox A3
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Probe:
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Mo-10 probe2
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Probe preparation:
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Antisense labelled with S35 RNA
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Visualized with:
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Autoradiography
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Results
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Specimen
1B:
embryonic day 7.5
(more )
Note: Early 7.5 day embryo.
Specimen
1B:
(close )
Genetic Background:
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(CBA x C57BL/6)F1
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Age:
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embryonic day 7.5
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Age Note:
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Theiler stage of this specimen assigned by curators from EMAGE.
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Sex:
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Not Specified
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Type:
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section
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Note:
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Early 7.5 day embryo.
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Specimen
2B:
embryonic day 7.5
(more )
Note: First signs of head fold have appeared; the allantois is well developed.
Specimen
2B:
(close )
Genetic Background:
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(CBA x C57BL/6)F1
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Age:
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embryonic day 7.5
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Sex:
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Not Specified
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Type:
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section
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Note:
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First signs of head fold have appeared; the allantois is well developed.
|
Structure |
Level |
Pattern |
Image |
Note |
TS11: embryo ectoderm |
Present |
Regionally restricted |
2B
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Transcripts were located in the ectoderm and mesoderm layers of the posterior half of the embryo.
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TS11: embryo mesoderm |
Present |
Regionally restricted |
2B
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Transcripts were located in the ectoderm and mesoderm layers of the posterior half of the embryo.
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TS11: allantois |
Present |
|
2B
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Specimen
3B:
embryonic day 7.5
(more )
Note: Intermediate 7.5 day embryo
Specimen
3B:
(close )
Genetic Background:
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(CBA x C57BL/6)F1
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Age:
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embryonic day 7.5
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Sex:
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Not Specified
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Type:
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section
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Note:
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Intermediate 7.5 day embryo
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Structure |
Level |
Pattern |
Image |
Note |
TS11: embryo ectoderm |
Present |
Regionally restricted |
3B
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Transcripts were detected over the complete posterior half of the ectoderm and mesoderm layers.
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TS11: embryo mesoderm |
Present |
Regionally restricted |
3B
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Transcripts were detected over the complete posterior half of the ectoderm and mesoderm layers.
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Specimen
4B:
embryonic day 8.0
(more )
Note: 3 somites; head fold is well developed.
Specimen
4B:
(close )
Genetic Background:
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(CBA x C57BL/6)F1
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Age:
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embryonic day 8.0
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Sex:
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Not Specified
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Type:
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section
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Note:
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3 somites; head fold is well developed.
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: allantois |
Present |
|
4B
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TS12: embryo ectoderm |
Present |
Regionally restricted |
4B
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Transcripts were seen in the posterior regions of ectoderm and mesoderm. Both within ectoderm and mesoderm tissues, the anterior limits of transcripts extended anterior to the position of first somite formation.
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TS12: embryo mesenchyme |
Present |
Regionally restricted |
4B
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Transcripts were seen in the posterior regions of ectoderm and mesoderm. Both within ectoderm and mesoderm tissues, the anterior limits of transcripts extended anterior to the position of first somite formation.
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Specimen
5B:
embryonic day 8.25
(more )
Note: 8 somites.
Specimen
5B:
(close )
Genetic Background:
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(CBA x C57BL/6)F1
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Age:
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embryonic day 8.25
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Sex:
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Not Specified
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Type:
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section
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Note:
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8 somites.
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Specimen
6D:
embryonic day 12.5
(more )
Specimen
6D:
(close )
Genetic Background:
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(CBA x C57BL/6)F1
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Structure |
Level |
Pattern |
Image |
Note |
TS20: thyroid gland |
Strong |
|
6D
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TS20: pharynx |
Weak |
Regionally restricted |
6D
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Less-intense labelling was seen generally over tissue which formed the floor of the pharynx.
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TS20: thyroglossal duct |
Weak |
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6D
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TS20: tongue |
Absent |
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6D
|
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TS20: C1 vertebral cartilage condensation |
Present |
Regionally restricted |
6D
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Transcripts were clearly present in the most anterior prevertebrae, including prevertebra 1 (C1).All prevertebrae were labelled; prevertebrae 10-14 (T3-T7) are shown.
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TS20: T3 vertebral cartilage condensation |
Present |
Regionally restricted |
6D
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Transcripts were clearly present in the most anterior prevertebrae, including prevertebra 1 (C1).All prevertebrae were labelled; prevertebrae 10-14 (T3-T7) are shown.
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TS20: T4 vertebral cartilage condensation |
Present |
Regionally restricted |
6D
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Transcripts were clearly present in the most anterior prevertebrae, including prevertebra 1 (C1).All prevertebrae were labelled; prevertebrae 10-14 (T3-T7) are shown.
|
TS20: T5 vertebral cartilage condensation |
Present |
Regionally restricted |
6D
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Transcripts were clearly present in the most anterior prevertebrae, including prevertebra 1 (C1).All prevertebrae were labelled; prevertebrae 10-14 (T3-T7) are shown.
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TS20: T6 vertebral cartilage condensation |
Present |
Regionally restricted |
6D
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Transcripts were clearly present in the most anterior prevertebrae, including prevertebra 1 (C1).All prevertebrae were labelled; prevertebrae 10-14 (T3-T7) are shown.
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TS20: T7 vertebral cartilage condensation |
Present |
Regionally restricted |
6D
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Transcripts were clearly present in the most anterior prevertebrae, including prevertebra 1 (C1).All prevertebrae were labelled; prevertebrae 10-14 (T3-T7) are shown.
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TS20: vertebral pre-cartilage condensation |
Present |
Regionally restricted |
6D
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Transcripts were clearly present in the most anterior prevertebrae, including prevertebra 1 (C1).All prevertebrae were labelled; prevertebrae 10-14 (T3-T7) are shown.
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Specimen
6F:
embryonic day 12.5
(more )
Specimen
6F:
(close )
Genetic Background:
|
(CBA x C57BL/6)F1
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Age:
|
embryonic day 12.5
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Sex:
|
Not Specified
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Type:
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section
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: nervous system |
Present |
Regionally restricted |
6F
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The anterior boundary of expression is within the preotic hindbrain.
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TS20: spinal cord |
Present |
Graded |
6F
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There is a gradual anterior-to-posterior reduction in the intensity of labelling along the length of the spinal cord.
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TS20: C1 vertebral cartilage condensation |
Present |
Regionally restricted |
6F
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Transcripts were clearly present in the most anterior prevertebrae, including prevertebra 1 (C1).All prevertebrae were labelled; prevertebrae 10-14 (T3-T7) are shown
|
TS20: T3 vertebral cartilage condensation |
Present |
Regionally restricted |
6F
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Transcripts were clearly present in the most anterior prevertebrae, including prevertebra 1 (C1).All prevertebrae were labelled; prevertebrae 10-14 (T3-T7) are shown
|
TS20: T4 vertebral cartilage condensation |
Present |
Regionally restricted |
6F
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Transcripts were clearly present in the most anterior prevertebrae, including prevertebra 1 (C1).All prevertebrae were labelled; prevertebrae 10-14 (T3-T7) are shown
|
TS20: T5 vertebral cartilage condensation |
Present |
Regionally restricted |
6F
|
Transcripts were clearly present in the most anterior prevertebrae, including prevertebra 1 (C1).All prevertebrae were labelled; prevertebrae 10-14 (T3-T7) are shown
|
TS20: T6 vertebral cartilage condensation |
Present |
Regionally restricted |
6F
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Transcripts were clearly present in the most anterior prevertebrae, including prevertebra 1 (C1).All prevertebrae were labelled; prevertebrae 10-14 (T3-T7) are shown
|
TS20: T7 vertebral cartilage condensation |
Present |
Regionally restricted |
6F
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Transcripts were clearly present in the most anterior prevertebrae, including prevertebra 1 (C1).All prevertebrae were labelled; prevertebrae 10-14 (T3-T7) are shown
|
TS20: lung |
Present |
Regionally restricted |
6F
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Transcripts were restricted to mesodermal components and were not detected in the endodermally-derived lining epithelium.
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Specimen
6H:
embryonic day 12.5
(more )
Specimen
6H:
(close )
Genetic Background:
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(CBA x C57BL/6)F1
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Age:
|
embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Specimen
not shown:
embryonic day 12.5
(more )
Specimen
not shown:
(close )
Genetic Background:
|
(CBA x C57BL/6)F1
|
Age:
|
embryonic day 12.5
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Sex:
|
Not Specified
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Type:
|
section
|
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