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Gene Expression Data
Assay Details
Assay
Reference: J:339602 Montillot C, et al., Characterization of Vps13b-mutant mice reveals neuroanatomical and behavioral phenotypes with females less affected. Neurobiol Dis. 2023 Sep;185:106259
Assay type: RT-PCR
MGI Accession ID: MGI:8192847
Gene symbol: Vps13b
Gene name: vacuolar protein sorting 13B
Probe: Vps13b Ex35/36-pF, Vps13b Ex35/36-pR
Assay notes: Quantitative RT-PCR. Relative expression was normalized to Hprt or Gnas.
Results
 Sample Information Bands Other Sample Information
Lane AgeStructure Size Not Specified Amount Genetic BackgroundMutant Allele(s)Sex
Hippocampus WT P w 19 TS28: hippocampus Present Not Specified; total RNA involves: C57BL/6J * C57BL/6N Female
Hippocampus HOM P w 19 TS28: hippocampus Present (a) Not Specified; total RNA involves: C57BL/6J * C57BL/6N Vps13btm1.2Ics/Vps13btm1.2IcsFemale
Cerebellum WT P w 19 TS28: cerebellum Present Not Specified; total RNA involves: C57BL/6J * C57BL/6N Female
Cerebellum HOM P w 19 TS28: cerebellum Weak (b) Not Specified; total RNA involves: C57BL/6J * C57BL/6N Vps13btm1.2Ics/Vps13btm1.2IcsFemale
Cortex WT P w 19 TS28: cerebral cortex Present Not Specified; total RNA involves: C57BL/6J * C57BL/6N Female
Cortex HOM P w 19 TS28: cerebral cortex Present (a) Not Specified; total RNA involves: C57BL/6J * C57BL/6N Vps13btm1.2Ics/Vps13btm1.2IcsFemale
Notes:
(a) Nonsense-mediated decay (NMD) does not take place in hippocampus and cortex of mutant HOM mice.
(b) Marginal nonsense-mediated decay (NMD) in cerebellum of mutant HOM mice.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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10/13/2026
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