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Gene Expression Data
Assay Details
Assay
Reference: J:235871 Shishikura M, et al., Expression of receptor protein tyrosine phosphatase delta, PTPdelta, in mouse central nervous system. Brain Res. 2016 Jul 1;1642:244-54
Assay type: Immunohistochemistry
MGI Accession ID: MGI:7867627
Gene symbol: Ptprd
Gene name: protein tyrosine phosphatase receptor type D
Antibody: F34a6
Detection system: Biotinylated secondary antibody/[Strept]avidin coupled to horseradish peroxidase
Results
Specimen 3C: postnatal day 20; Ptprdtm1Yiw/Ptprd+ (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb layer Strong Regionally restricted 3C Expression is moderately strong in the layers surrounding the mitral cell layer.
TS28: cerebral cortex Present Regionally restricted 3C Expression is in cortical axon bundles and in the cortical plate.
TS28: cerebellum Present 3C
TS28: hippocampus Present 3C
TS28: hypothalamus Present 3C
TS28: inferior colliculus Present 3C
TS28: pontine nucleus Present 3C
TS28: superior colliculus Present 3C
TS28: thalamic nucleus Present 3C
TS28: main olfactory bulb mitral cell layer Weak 3C
Specimen 3D: postnatal day 20; Ptprdtm1Yiw/Ptprdtm1Yiw (more )
Structure Level Pattern Image Note
TS28: brain Absent 3D
Specimen 4A: postnatal; Ptprdtm1Yiw/Ptprd+ (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb external plexiform layer Strong 4A
TS28: main olfactory bulb glomerular layer Strong 4A
TS28: main olfactory bulb internal plexiform layer Strong 4A
TS28: main olfactory bulb mitral cell layer Weak 4A
Specimen 4B: postnatal; Ptprdtm1Yiw/Ptprdtm1Yiw (more )
Structure Level Pattern Image Note
TS28: brain Absent 4B
Specimen 4C: postnatal (more )
Structure Level Pattern Image Note
TS28: corpus callosum Moderate 4C
TS28: cortical layer II Moderate 4C
TS28: cortical layer III Moderate 4C
TS28: cortical layer V Moderate 4C
TS28: cortical layer I Present 4C
TS28: cortical layer IV Present 4C
TS28: cortical layer VI Present 4C
TS28: caudate-putamen Present Scattered 4C Expression is scattered in the descending cortical axons.
Specimen 4D: postnatal; Ptprdtm1Yiw/Ptprdtm1Yiw (more )
Structure Level Pattern Image Note
TS28: brain Absent 4D
Specimen 4E: postnatal; Ptprdtm1Yiw/Ptprd+ (more )
Structure Level Pattern Image Note
TS28: dentate gyrus molecular layer Strong 4E
TS28: hippocampus molecular layer Strong 4E
TS28: hippocampus stratum lacunosum Strong 4E
TS28: CA2 pyramidal cell layer Present 4E
TS28: CA3 pyramidal cell layer Present 4E
TS28: hippocampus alveus Present 4E
TS28: dentate gyrus granule cell layer Trace 4E
TS28: CA1 pyramidal cell layer Absent 4E
Specimen 4F: postnatal; Ptprdtm1Yiw/Ptprdtm1Yiw (more )
Structure Level Pattern Image Note
TS28: brain Absent 4F
Specimen 4G: postnatal; Ptprdtm1Yiw/Ptprd+ (more )
Structure Level Pattern Image Note
TS28: cerebellum layer Strong Regionally restricted 4G Expression is at the border of the molecular and Purkinje cell layer.
TS28: cerebellum granule cell layer Moderate 4G
TS28: cerebellum molecular layer Moderate 4G
TS28: cerebellum Purkinje cell layer Present 4G
Specimen 4H: postnatal; Ptprdtm1Yiw/Ptprdtm1Yiw (more )
Structure Level Pattern Image Note
TS28: brain Absent 4H
Specimen 4I: postnatal; Ptprdtm1Yiw/Ptprd+ (more )
Structure Level Pattern Image Note
TS28: cochlear nucleus Present 4I
TS28: pontine nucleus Present 4I
Specimen 4J: postnatal; Ptprdtm1Yiw/Ptprdtm1Yiw (more )
Structure Level Pattern Image Note
TS28: brain Absent 4J
Specimen 4K: postnatal (more )
Structure Level Pattern Image Note
TS28: inferior cerebellar peduncle Strong 4K
TS28: corticospinal tract Present 4K
Specimen 4L: postnatal; Ptprdtm1Yiw/Ptprdtm1Yiw (more )
Structure Level Pattern Image Note
TS28: brain Absent 4L
Specimen Table 2: postnatal (more )
Structure Level Pattern Image Note
TS28: cerebellum molecular layer Strong
TS28: cerebral internal capsule Strong
TS28: cochlear nucleus Strong
TS28: corpus callosum Strong
TS28: dentate gyrus molecular layer Strong
TS28: hippocampus molecular layer Strong
TS28: hippocampus stratum lacunosum Strong
TS28: inferior olivary nucleus Strong
TS28: main olfactory bulb glomerular layer Strong
TS28: hippocampus CA2 Strong Regionally restricted Expression is in the stratum lacunosum-moleculare, weak in the stratum radiatum, oriens, and stratum pyramidale.
TS28: hippocampus CA3 Strong Regionally restricted Expression is in the stratum lacunosum-moleculare, weak in the stratum radiatum, oriens, and stratum pyramidale.
TS28: hippocampus CA1 Strong Regionally restricted Expression is in the stratum lacunosum-moleculare, weak in the stratum radiatum and oriens, and is absent in the stratum pyramidale.
TS28: cerebellum granule cell layer Moderate
TS28: cortical layer II Moderate
TS28: cortical layer III Moderate
TS28: cortical layer V Moderate
TS28: hypothalamus Moderate
TS28: inferior colliculus Moderate
TS28: main olfactory bulb external plexiform layer Moderate
TS28: main olfactory bulb internal plexiform layer Moderate
TS28: nucleus of diagonal band Moderate
TS28: piriform cortex Moderate
TS28: pontine nucleus Moderate
TS28: superior colliculus Moderate
TS28: thalamus Moderate
TS28: brain nucleus Moderate Regionally restricted Expression is in the reticular nucleus and weak in the lateral dorsal nucleus.
TS28: cerebellum Purkinje cell layer Weak
TS28: cortical layer I Weak
TS28: cortical layer IV Weak
TS28: cortical layer VI Weak
TS28: main olfactory bulb granule cell layer Weak
TS28: main olfactory bulb mitral cell layer Weak
TS28: caudate-putamen Trace
TS28: dentate gyrus granule cell layer Trace
TS28: substantia nigra Trace
Specimen not shown: postnatal; Ptprdtm1Yiw/Ptprd+ (more )
Structure Level Pattern Image Note
TS28: inferior olivary nucleus Strong
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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10/06/2026
MGI 6.29 		The Jackson Laboratory