Slit1 RNA in situ Gene Expression Assay

Gene Expression Data
Assay Details

Assay

Reference:	J:147382 Genethliou N, et al., Spatially distinct functions of PAX6 and NKX2.2 during gliogenesis in the ventral spinal cord. Biochem Biophys Res Commun. 2009 Apr 24;382(1):69-73
Assay type:	RNA in situ
MGI Accession ID:	MGI:7865513
Gene symbol:	Slit1
Gene name:	slit guidance ligand 1

Probe:	Slit1 probe
Probe preparation:	Antisense RNA

Results

Specimen 1B: embryonic day 12.5 (more

)

Structure	Level	Pattern	Image	Note
TS20: spinal cord floor plate	Present		1B
TS20: spinal cord ventricular layer	Present		1B

Specimen 1D: embryonic day 12.5; Pax6^Sey/Pax6^Sey (more

)

Structure	Level	Pattern	Image	Note
TS20: spinal cord floor plate	Present		1D
TS20: spinal cord ventricular layer	Present		1D

Specimen 1F: embryonic day 12.5; Nkx2-2^tm1Jlr/Nkx2-2^tm1Jlr (more

)

Structure	Level	Pattern	Image	Note
TS20: spinal cord floor plate	Present		1F
TS20: spinal cord ventricular layer	Absent		1F

Specimen not shown WT: embryonic day 10.5 (more

)

Structure	Level	Pattern	Image	Note
TS17: neural tube floor plate	Present

Specimen not shown Pax6^-/-: embryonic day 10.5; Pax6^Sey/Pax6^Sey (more

)

Structure	Level	Pattern	Image	Note
TS17: neural tube floor plate	Present			Expression is the same as in wild-type.

Specimen not shown Nkx2.2^-/-: embryonic day 10.5; Nkx2-2^tm1Jlr/Nkx2-2^tm1Jlr (more

)

Structure	Level	Pattern	Image	Note
TS17: neural tube floor plate	Present			Expression is the same as in wild-type.

Specimen S1A: embryonic day 10.5 (more

)

Structure	Level	Pattern	Image	Note
TS17: neural tube floor plate	Present		S1A

Specimen S1B: embryonic day 12.5 (more

)
Note: Double labeled: green - Slit1; red - Olig2 (assay MGI:7865527).

Structure	Level	Pattern	Image	Note
TS20: spinal cord floor plate	Present		S1B

Specimen S3E: embryonic day 18.5 (more

)

Structure	Level	Pattern	Image	Note
TS26: spinal cord white matter	Present		S3E

Specimen S3F: embryonic day 18.5; Nkx2-2^tm1Jlr/Nkx2-2^tm1Jlr (more

)

Structure	Level	Pattern	Image	Note
TS26: spinal cord white matter	Weak		S3F

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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