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Gene Expression Data
Assay Details
Assay
Reference: J:189472 Armendariz BG, et al., Expression of Semaphorin 4F in neurons and brain oligodendrocytes and the regulation of oligodendrocyte precursor migration in the optic nerve. Mol Cell Neurosci. 2012 Jan;49(1):54-67
Assay type: Immunohistochemistry
MGI Accession ID: MGI:7860829
Gene symbol: Sema4f
Gene name: sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain
Antibody: anti-4F
Detection system: Secondary antibody coupled to horseradish peroxidase
Results
Specimen 3A: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: forebrain Present Widespread 3A Expression in most brain regions from E14. No expression in some proliferative layers.
TS22: brainstem Strong 3A Expression especially prominent in olfactory bulb, cerebral cortex, hippocampus and brainstem.
TS22: cerebral cortex Strong 3A Expression especially prominent in olfactory bulb, cerebral cortex, hippocampus and brainstem.
TS22: hippocampus Strong 3A Expression especially prominent in olfactory bulb, cerebral cortex, hippocampus and brainstem.
TS22: main olfactory bulb Strong 3A Expression especially prominent in olfactory bulb, cerebral cortex, hippocampus and brainstem.
TS22: cortical plate Strong 3A
TS22: nerve fiber tract Present Regionally restricted 3A Expression in regions rich in oligodendroglial precursors, such a mamillothalamic tract.

Specimen 3B: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: cortical plate Present 3B
TS26: hippocampus Strong Regionally restricted 3B Strong expression in hippocampus. Expression in embryonic fimbria.
TS26: hypothalamus Trace Widespread 3B Faint widespread expression at embryonic stages.

Specimen 3C: postnatal adult (more )
Structure Level Pattern Image Note
TS28: forebrain Present Regionally restricted 3C
TS28: hippocampus Strong 3C Significant expression in adult.

Specimen 3D: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: telencephalon Strong 3D High expression between E16 and P0.
TS24: cortical plate Present 3D

Specimen 3E: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: hippocampus Strong Regionally restricted 3E Strong expression in hippocampus. Expression in embryonic fimbria.

Specimen 3F: postnatal adult (more )
Structure Level Pattern Image Note
TS28: hippocampus Present 3F Significant expression at P15.

Specimen 3G: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: corpus callosum Present Regionally restricted 3G Expression in cells of oligodendroglial shape as early as P0 in corpus callosum.
TS27: telencephalon septum Present 3G

Specimen 3H: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: telencephalon subventricular zone Strong Regionally restricted 3H Strong expression in anterior subventricular zone around P0.

Specimen 3I: postnatal adult (more )
Structure Cell Type Level Pattern Image Note
TS28: telencephalon subventricular zone Present Regionally restricted 3I Expression in anterior subventricular zone in adult.
TS28: corpus callosum oligodendrocyte Present Regionally restricted 3I Expression in mature oligodendrocytes in corpus callosum.

Specimen 3J: postnatal adult (more )
Structure Level Pattern Image Note
TS28: entorhinal cortex Strong 3J Expression especially outstanding in entorhinal cortex.

Specimen 3K: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: corpora quadrigemina Strong 3K Prominent expression in oculomotor nucleus, periaqueductal gray area, colliculi, raphe and pararubral nuclei.
TS27: oculomotor nucleus Strong 3K Prominent expression in oculomotor nucleus, periaqueductal gray area, colliculi, raphe and pararubral nuclei.
TS27: periaqueductal grey Strong 3K Prominent expression in oculomotor nucleus, periaqueductal gray area, colliculi, raphe and pararubral nuclei.
TS27: raphe nucleus Strong 3K Prominent expression in oculomotor nucleus, periaqueductal gray area, colliculi, raphe and pararubral nuclei.

Specimen 3L: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: main olfactory bulb Strong 3L Expression especially prominent in olfactory bulb.
TS22: facial nucleus Present 3L

Specimen 3M: postnatal adult (more )
Structure Level Pattern Image Note
TS28: rostral migratory stream Present 3M

Specimen 3N: postnatal adult (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb glomerular layer Present 3N Expression in olfactory bulb, mainly in mitral cell layer and glomerular layer.
TS28: main olfactory bulb mitral cell layer Present 3N Expression in olfactory bulb, mainly in mitral cell layer and glomerular layer.

Specimen 3O: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: hypothalamus Present Regionally restricted 3O Expression in early postnatal hypothalamus, higher in particular areas at postnatal stages. Remarkable intensity of expression near arcuate and posterior hypothalamic nuclei.

Specimen 3P: postnatal day 15 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Present 3P

Specimen 3Q: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebellum Present Widespread 3Q Expression in most cell types of cerebellum.v

Specimen 5A: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: hypothalamus Present 5A Expression in early postnatal hypothalamus

Specimen 5B,C: postnatal day 15 (more )
Structure Level Pattern Image Note
TS28: arcuate nucleus Present 5C , 5B Expression in cells near arcuate nucleus.

Specimen 5F: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: corpus callosum Present 5F

Specimen 5G: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: anterior commissure Present 5G Expression in cells of oligodendroglial shape as early as P0.

Specimen 5I: postnatal adult (more )
Structure Cell Type Level Pattern Image Note
TS28: corpus callosum oligodendrocyte Present 5I Expression in mature oligodendrocytes.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory