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Gene Expression Data
Assay Details
Assay
Reference: J:174731 Bielle F, et al., Slit2 activity in the migration of guidepost neurons shapes thalamic projections during development and evolution. Neuron. 2011 Mar 24;69(6):1085-98
Assay type: RNA in situ
MGI Accession ID: MGI:7791010
Gene symbol: Lhx6
Gene name: LIM homeobox protein 6
Probe: Lhx6 probe
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen S4B: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: medial ganglionic eminence Present S4B
TS21: preoptic area Present Regionally restricted S4B Expressed in the anterior preoptic area.
TS21: telencephalon Present Regionally restricted S4B Expressed in the corridor cells and globus pallidus.
Specimen S4E: embryonic day 13.5; Slit2tm1Matl/Slit2tm1Matl (more )
Structure Level Pattern Image Note
TS21: medial ganglionic eminence Present S4E
TS21: telencephalon Present Regionally restricted S4E Reduced expression in the globus pallidus and corridor region, compared with the control.
Specimen S4H: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: globus pallidus Present S4H
TS22: medial ganglionic eminence Present S4H
TS22: corpus striatum Weak S4H
TS22: preoptic area Weak Regionally restricted S4H Expressed in the anterior preoptic area.
Specimen S4K: embryonic day 14.5; Slit1tm1.1Matl/Slit1tm1.1Matl, Slit2tm1Matl/Slit2tm1Matl (more )
Structure Level Pattern Image Note
TS22: medial ganglionic eminence Present S4K
TS22: globus pallidus Present S4K Reduced expression compared with the control.
TS22: preoptic area Ambiguous S4K Expression in the anterior preoptic area was either absent or trace.
TS22: telencephalon Weak Regionally restricted S4K Weak expression in the corridor cells.
TS22: corpus striatum Weak S4K
Specimen not shown: embryonic day 13.0 (more )
Note: Authors stated that RNA expression was examined on dpc 13-14.5; not all stages are detailed.
Structure Level Pattern Image Note
TS21: medial ganglionic eminence Present
TS21: preoptic area Present Regionally restricted Expressed in the anterior preoptic area.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
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