Gene Expression Data
Assay Details
Assay
|
Reference:
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J:157241
Uhde CW, et al., Rmst is a novel marker for the mouse ventral mesencephalic floor plate and the anterior dorsal midline cells. PLoS One. 2010;5(1):e8641
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:7778464
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Gene symbol:
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Rmst
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Gene name:
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rhabdomyosarcoma 2 associated transcript (non-coding RNA)
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Probe:
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Rmst cDNA
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Results
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Specimen
1A:
embryonic day 9.5
(more )
Specimen
1A:
(close )
Genetic Background:
|
MF1
|
Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
1B:
embryonic day 9.5
(more )
Specimen
1B:
(close )
Genetic Background:
|
MF1
|
Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: future brain |
Present |
Regionally restricted |
1B
|
Expressed in the dorsal midline of the anterior neural axis.
|
TS15: diencephalon |
Present |
Regionally restricted |
1B
|
At the level of rostral diencephalon the expression domain expanded laterally into the alar plate and further to the basal plate at the caudal diencephalon.
|
TS15: midbrain-hindbrain junction |
Present |
|
1B
|
A prominent band of expression was observed in the isthmus.
|
Specimen
1C:
embryonic day 10.5
(more )
Specimen
1C:
(close )
Genetic Background:
|
MF1
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
1D:
embryonic day 10.5
(more )
Specimen
1D:
(close )
Genetic Background:
|
MF1
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
2A:
embryonic day 9.5
(more )
Specimen
2A:
(close )
Genetic Background:
|
MF1
|
Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: telencephalon |
Present |
Regionally restricted |
2A
|
Expressed in the dorsal midline.
|
Specimen
2B:
embryonic day 9.5
(more )
Specimen
2B:
(close )
Genetic Background:
|
MF1
|
Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: diencephalon |
Present |
Regionally restricted |
2B
|
Expression extended to the alar plate. Expressed also in the caudal ventral region.
|
Specimen
2C:
embryonic day 9.5
(more )
Specimen
2C:
(close )
Genetic Background:
|
MF1
|
Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: future midbrain |
Present |
Regionally restricted |
2C
|
Expressed in the dorsal midline.
|
Specimen
2D:
embryonic day 9.5
(more )
Specimen
2D:
(close )
Genetic Background:
|
MF1
|
Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: future midbrain |
Present |
Regionally restricted |
2D
|
Expression was primarily restricted to the dorsal midline.
|
Specimen
2E:
embryonic day 10.5
(more )
Specimen
2E:
(close )
Genetic Background:
|
MF1
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: telencephalon |
Present |
Regionally restricted |
2E
|
Expressed in the dorsal midline.
|
Specimen
2F:
embryonic day 10.5
(more )
Specimen
2F:
(close )
Genetic Background:
|
MF1
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: diencephalon |
Present |
Regionally restricted |
2F
|
Expressed dorsally. Expression extended to the alar plate.
|
Specimen
2G:
embryonic day 10.5
(more )
Specimen
2G:
(close )
Genetic Background:
|
MF1
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
2H:
embryonic day 10.5
(more )
Specimen
2H:
(close )
Genetic Background:
|
MF1
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: midbrain |
Present |
Regionally restricted |
2H
|
Expression was primarily restricted to the dorsal midline.
|
Specimen
2I:
embryonic day 10.5
(more )
Specimen
2I:
(close )
Genetic Background:
|
MF1
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: hindbrain |
Present |
Regionally restricted |
2I
|
Expression was primarily restricted to the dorsal midline. Expression was observed in the dorsal rhombic lip.
|
Specimen
2J:
embryonic day 10.5
(more )
Specimen
2J:
(close )
Genetic Background:
|
MF1
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: future spinal cord |
Present |
Regionally restricted |
2J
|
Expressed in the rostral spinal cord. Expression was primarily restricted to the dorsal midline.
|
Specimen
3A:
embryonic day 11.5
(more )
Specimen
3A:
(close )
Genetic Background:
|
MF1
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: midbrain |
Strong |
Regionally restricted |
3A
|
Expressed in both the roof plate and the floor plate, as well as in the most outer layer of cells in the alar plate and intermediate zone of the basal plate.
|
TS19: midbrain floor plate |
Strong |
|
3A
|
Expression level was high in the Lmx1a expressing region.
|
TS19: midbrain roof plate |
Present |
|
3A
|
|
Specimen
3B:
embryonic day 12.5
(more )
Specimen
3B:
(close )
Genetic Background:
|
MF1
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: midbrain |
Strong |
Regionally restricted |
3B
|
Expressed in both the roof plate and the floor plate, as well as in the most outer layer of cells in the alar plate and intermediate zone of the basal plate.
|
TS20: midbrain floor plate |
Strong |
|
3B
|
Expression level was high in the Lmx1a expressing region.
|
TS20: midbrain roof plate |
Present |
|
3B
|
|
Specimen
3C:
embryonic day 11.5
(more )
Specimen
3C:
(close )
Genetic Background:
|
MF1
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
3D:
embryonic day 12.5
(more )
Specimen
3D:
(close )
Genetic Background:
|
MF1
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
3E:
embryonic day 13.5
(more )
Specimen
3E:
(close )
Genetic Background:
|
MF1
|
Age:
|
embryonic day 13.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
3F:
embryonic day 14.5
(more )
Specimen
3F:
(close )
Genetic Background:
|
MF1
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: midbrain |
Present |
Regionally restricted |
3F
|
Expression was primarily restricted to the forming ventral tegmental area that lies immediately adjacent to the ventral midline.
|
TS22: red nucleus |
Present |
|
3F
|
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