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Gene Expression Data
Assay Details
Assay
Reference: J:321499 Lee DR, et al., Transcriptional heterogeneity of ventricular zone cells in the ganglionic eminences of the mouse forebrain. Elife. 2022 Feb 17;11:e71864
Assay type: RNA in situ
MGI Accession ID: MGI:7720308
Gene symbol: Id4
Gene name: inhibitor of DNA binding 4
Probe: Mm-Id4 (447861)
Probe preparation: Antisense RNA
Visualized with: Fluorescence
Results
Specimen 5C LGE/MGE: embryonic day 12.5 (more )
Note: Double labeled: cyan - Id4; magenta - Mest (assay MGI:7720307).
Structure Level Pattern Image Note
TS20: lateral ganglionic eminence Present Regionally restricted 5C left Expression was detected in ventricular zone cells throughout the lateral ganglionic eminence and the medial ganglionic eminence.
TS20: medial ganglionic eminence Present Regionally restricted 5C left Expression was detected in ventricular zone cells throughout the lateral ganglionic eminence and the medial ganglionic eminence.

Specimen 5C CGE: embryonic day 12.5 (more )
Note: Double labeled: cyan - Id4; magenta - Mest (assay MGI:7720307).
Structure Level Pattern Image Note
TS20: caudal ganglionic eminence Present Regionally restricted 5C right Expression was detected in ventricular zone cells throughout the caudal ganglionic eminence.

Specimen 8C E12.5 MGE & LGE: embryonic day 12.5 (more )
Note: Double labeled: cyan - Id4; magenta - Cited2 (assay MGI:7720388).
Structure Level Pattern Image Note
TS20: lateral ganglionic eminence Present Regionally restricted 8C E12.5 MGE & LGE Expression was detected in the ventricular zone cells.
TS20: medial ganglionic eminence Present Regionally restricted 8C E12.5 MGE & LGE Expression was detected in the ventricular zone cells.

Specimen 8C E14.5 MGE & LGE: embryonic day 14.5 (more )
Note: Double labeled: cyan - Id4; magenta - Cited2 (assay MGI:7720388).
Structure Level Pattern Image Note
TS22: lateral ganglionic eminence Present Regionally restricted 8C E14.5 MGE & LGE Expression was strongly downregulated in the ventricular zone cells compared to E12.5. Expression was significantly upregulated in the subventricular zone cells compared to E12.5.
TS22: medial ganglionic eminence Ambiguous Regionally restricted 8C E14.5 MGE & LGE Expression was strongly downregulated in the ventricular zone cells compared to E12.5.

Specimen 8C E12.5 CGE: embryonic day 12.5 (more )
Note: Double labeled: cyan - Id4; magenta - Cited2 (assay MGI:7720388).
Structure Level Pattern Image Note
TS20: caudal ganglionic eminence Ambiguous 8C E12.5 CGE

Specimen 8C E14.5 CGE: embryonic day 14.5 (more )
Note: Double labeled: cyan - Id4; magenta - Cited2 (assay MGI:7720388).
Structure Level Pattern Image Note
TS22: caudal ganglionic eminence Present Regionally restricted 8C E14.5 CGE Expression was significantly upregulated in the subventricular zone cells compared to E12.5.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory