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Gene Expression Data
Assay Details
Assay
Reference: J:112922 Miura E, et al., Distinct expression of Cbln family mRNAs in developing and adult mouse brains. Eur J Neurosci. 2006 Aug;24(3):750-60
Assay type: RNA in situ
MGI Accession ID: MGI:7664062
Gene symbol: Cbln1
Gene name: cerebellin 1 precursor protein
Probe: Cbln1 probe
Probe preparation: labelled with P33
Visualized with: Autoradiography
Results
Specimen 1B: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebellar cortex Strong 1B Highest level of expression in cerebellar cortex.
TS28: deep cerebellar nucleus Strong 1B High level of expression on olfactory bulb and deep cerebellar nuclei.
TS28: main olfactory bulb Strong 1B High level of expression on olfactory bulb and deep cerebellar nuclei.
TS28: cerebral cortex Strong Regionally restricted 1B High level of expression on posterior part of cerebral cortex and certain thalamic nuclei.
TS28: thalamic nucleus Strong Regionally restricted 1B High level of expression on posterior part of cerebral cortex and certain thalamic nuclei.
TS28: brainstem nucleus Strong Regionally restricted 1B Low to moderate expression in some hypothalamic and brainstem nuclei.
TS28: hypothalamic nucleus Strong Regionally restricted 1B Low to moderate expression in some hypothalamic and brainstem nuclei.

Specimen 2A: postnatal adult (more )
Structure Level Pattern Image Note
TS28: telencephalon Weak Regionally restricted 2A Expression barely detected in telencephalic region.
TS28: anterior dorsal thalamic nucleus Strong 2A Highly expressed in anterior thalamic group.
TS28: anterior ventral thalamic nucleus Strong 2A Highly expressed in anterior thalamic group.
TS28: central medial thalamic nucleus Trace 2A
TS28: paraventricular thalamic nucleus Weak 2A
TS28: nucleus reuniens Absent 2A
TS28: paraventricular hypothalamic nucleus Moderate 2A
TS28: hypothalamic nucleus Moderate Regionally restricted 2A Moderate expression in periventricular and lateroanterior nuclei.

Specimen 2D: postnatal adult (more )
Structure Level Pattern Image Note
TS28: retrosplenial granular cortex Strong 2D
TS28: CA1 pyramidal cell layer Absent 2D
TS28: CA3 pyramidal cell layer Absent 2D
TS28: dentate gyrus granule cell layer Absent 2D
TS28: subiculum Absent 2D
TS28: parafascicular nucleus Strong 2D
TS28: hypothalamic nucleus Moderate Regionally restricted 2D Moderate expression in posterior nucleus.
TS28: dorsal lateral geniculate nucleus Absent 2D

Specimen 2G: postnatal adult (more )
Structure Level Pattern Image Note
TS28: entorhinal cortex Moderate 2G
TS28: dorsal raphe nucleus Trace 2G

Specimen 2J: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebellum Very strong 2J Striking levels of expression in cerebellum.
TS28: solitary tract nucleus Trace 2J

Specimen 3A1: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: cerebellum Strong 3A1 Expression detected as early as E13. High levels of expression in olfactory bulb, diencephalon and cerebellum throughout development.
TS21: diencephalon Strong 3A1 Expression detected as early as E13. High levels of expression in olfactory bulb, diencephalon and cerebellum throughout development.
TS21: main olfactory bulb Strong 3A1 Expression detected as early as E13. High levels of expression in olfactory bulb, diencephalon and cerebellum throughout development.

Specimen 3A2: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Strong 3A2 High levels of expression in olfactory bulb, diencephalon and cerebellum throughout development.
TS23: diencephalon Strong 3A2 High levels of expression in olfactory bulb, diencephalon and cerebellum throughout development.
TS23: main olfactory bulb Strong 3A2 High levels of expression in olfactory bulb, diencephalon and cerebellum throughout development.

Specimen 3A3: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: cerebellum Strong 3A3 High levels of expression in olfactory bulb, diencephalon and cerebellum throughout development.
TS25: diencephalon Strong 3A3 High levels of expression in olfactory bulb, diencephalon and cerebellum throughout development.
TS25: main olfactory bulb Strong 3A3 High levels of expression in olfactory bulb, diencephalon and cerebellum throughout development.

Specimen 3A4: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: cerebellum Strong 3A4 High levels of expression in olfactory bulb, diencephalon and cerebellum throughout development.
TS27: diencephalon Strong 3A4 High levels of expression in olfactory bulb, diencephalon and cerebellum throughout development.
TS27: main olfactory bulb Strong 3A4 High levels of expression in olfactory bulb, diencephalon and cerebellum throughout development.

Specimen 3A5: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: cerebellum Strong 3A5 High levels of expression in olfactory bulb, diencephalon and cerebellum throughout development.
TS28: diencephalon Strong 3A5 High levels of expression in olfactory bulb, diencephalon and cerebellum throughout development.
TS28: main olfactory bulb Strong 3A5 High levels of expression in olfactory bulb, diencephalon and cerebellum throughout development.
TS28: cerebral cortex Strong 3A5 Authors report expression in cortical regions from later embryonic to early postnatal stages, peaking at P7.

Specimen 3A6: postnatal day 14 (more )
Structure Level Pattern Image Note
TS28: cerebellum Strong 3A6 High levels of expression in olfactory bulb, diencephalon and crebellum throughout development.
TS28: diencephalon Strong 3A6 High levels of expression in olfactory bulb, diencephalon and crebellum throughout development.
TS28: main olfactory bulb Strong 3A6 High levels of expression in olfactory bulb, diencephalon and crebellum throughout development.

Specimen 3A7: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: cerebellum Strong 3A7 High levels of expression in olfactory bulb, diencephalon and crebellum throughout development.
TS28: diencephalon Strong 3A7 High levels of expression in olfactory bulb, diencephalon and crebellum throughout development.
TS28: main olfactory bulb Strong 3A7 High levels of expression in olfactory bulb, diencephalon and crebellum throughout development.

Specimen 4A: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: caudate-putamen Weak 4A Low but discrete transient expression in caudate putamen.

Specimen 4B: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: hippocampus pyramidal cell layer Weak 4B Low but discrete transient expression in hippocampal pyramidal cell layer at P0 and P7.

Specimen 4C: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: cerebellum external granule cell layer Present 4C
TS27: cerebellum Present Regionally restricted 4C Expression in deep regions just beneath Purkinje cell layer.
TS27: cerebellum Purkinje cell layer Absent 4C No significant expression in Purkinje cell layer.

Specimen 4D: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: deep cerebellar nucleus Present 4D

Specimen S2A: postnatal adult (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb mitral cell layer Strong S2A
TS28: main olfactory bulb glomerular layer Weak S2A
TS28: main olfactory bulb granule cell layer Absent S2A

Specimen S2D: postnatal adult (more )
Structure Level Pattern Image Note
TS28: neocortex layer Absent S2D
TS28: claustrum Moderate S2D
TS28: piriform cortex Absent S2D
TS28: endopiriform nucleus Absent S2D

Specimen S2G: postnatal adult (more )
Structure Level Pattern Image Note
TS28: claustrum Moderate S2G
TS28: entorhinal cortex Moderate S2G
TS28: medial septal nucleus Absent S2G

Specimen S2J: postnatal adult (more )
Structure Level Pattern Image Note
TS28: hypothalamus Weak Regionally restricted S2J Moderate expression in posterior area; weak expression in lateral area.
TS28: preoptic area Weak Regionally restricted S2J Weak expression in preoptic nucleus.
TS28: hypothalamic nucleus Moderate Regionally restricted S2J Moderate expression in periventricular nucleus and lateroanterior nucleus
TS28: paraventricular hypothalamic nucleus Moderate S2J
TS28: dorsomedial hypothalamic nucleus Weak S2J
TS28: arcuate nucleus Absent S2J

Specimen S3A: postnatal adult (more )
Structure Level Pattern Image Note
TS28: retrosplenial granular cortex Strong S3A
TS28: CA1 pyramidal cell layer Absent S3A
TS28: CA3 pyramidal cell layer Absent S3A
TS28: dentate gyrus granule cell layer Absent S3A
TS28: subiculum Absent S3A
TS28: medial habenular nucleus Absent S3A
TS28: lateral habenular nucleus Moderate S3A
TS28: ventral medial thalamic nucleus Weak S3A
TS28: ventromedial hypothalamic nucleus Strong S3A

Specimen S3D: postnatal adult (more )
Structure Level Pattern Image Note
TS28: superior colliculus Absent S3D
TS28: inferior colliculus Strong Regionally restricted S3D Strong expression in nucleus brachium of inferior colliculus. Weak expression in external nucleus and dorsal nucleus, No expression in cnetral nucleus.
TS28: median raphe nucleus Moderate S3D

Specimen S3G: postnatal adult (more )
Structure Level Pattern Image Note
TS28: dorsal nucleus of lateral lemniscus Strong S3G

Specimen S3J: postnatal adult (more )
Structure Level Pattern Image Note
TS28: dorsal cochlear nucleus Strong S3J
TS28: ventral cochlear nucleus Weak S3J
TS28: vestibular nucleus Moderate S3J
TS28: trigeminal V spinal sensory nucleus Moderate S3J
TS28: cerebellum Very strong S3J Striking levels of experssion in cerebellum.

Specimen S4B: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebellum granule cell layer Present S4B
TS28: cerebellum Purkinje cell layer Absent S4B
TS28: cerebellum molecular layer Absent S4B

Specimen not shown: postnatal adult (more )
Note: Data presented in Table 1.
Structure Level Pattern Image Note
TS28: oculomotor nucleus Weak
TS28: amygdala Absent
TS28: caudate-putamen Absent
TS28: globus pallidus Absent
TS28: lateral septal nucleus Absent
TS28: trigeminal V motor nucleus Absent
TS28: trigeminal V principal sensory nucleus Absent


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory