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Gene Expression Data
Assay Details
Assay
Reference: J:245526 Bibollet-Bahena O, et al., A dual-strategy expression screen for candidate connectivity labels in the developing thalamus. PLoS One. 2017;12(5):e0177977
Assay type: RNA in situ
MGI Accession ID: MGI:7657933
Gene symbol: Clstn1
Gene name: calsyntenin 1
Probe: Clstn1_riboprobe
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: The authors analyzed data from the Allen Developing Mouse Brain.
Results
Specimen 17 top: embryonic day 18.5 (more )
Note: Post-fixed in 4% paraformaldehyde. Section was from the lateral thalamus.
Structure Level Pattern Image Note
TS26: thalamus Present Widespread 17_lateral Clstn1 Widespread, but not ubiquitous, expression was observed across the developing thalamus in a lateral section.

Specimen 17 bottom: embryonic day 18.5 (more )
Note: Post-fixed in 4% paraformaldehyde. Section was from the medial thalamus.
Structure Level Pattern Image Note
TS26: thalamus Present Widespread 17_medial Clstn1 Widespread, but not ubiquitous, expression was observed across the developing thalamus in a medial section.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory