About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:65195 Stoykova A, et al., Pax6 modulates the dorsoventral patterning of the mammalian telencephalon. J Neurosci. 2000 Nov 1;20(21):8042-50
Assay type: RNA in situ
MGI Accession ID: MGI:7620209
Gene symbol: Lhx6
Gene name: LIM homeobox protein 6
Probe: Lhx6 probe
Probe preparation: Antisense labelled with S35 RNA
Results
Specimen 3A: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: medial ganglionic eminence mantle zone Present Regionally restricted 3A Expression is in a subpopulation of cells in the subventricular zone and submantle of the medial ganglionic eminence.
TS20: medial ganglionic eminence subventricular zone Present Regionally restricted 3A Expression is in a subpopulation of cells in the subventricular zone and submantle of the medial ganglionic eminence.
TS20: lateral ganglionic eminence Present Single cells 3A Expression is in a few positive cells in a proximal vicinity to the sulcus between medial and lateral ganglionic eminences.
Specimen 3A': embryonic day 12.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS20: medial ganglionic eminence Present 3A'
TS20: lateral ganglionic eminence Present Widespread 3A'
Specimen 3B: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: cerebral cortex intermediate zone Present 3B
TS22: cerebral cortex marginal layer Present 3B
TS22: cortical plate Present 3B
TS22: lateral ganglionic eminence mantle zone Present 3B
Specimen 3B': embryonic day 14.0; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS22: lateral ganglionic eminence Strong 3B'
TS22: cerebral cortex marginal layer Present 3B'
TS22: cortical plate Present Regionally restricted 3B' Expression is absent in the lower part.
Specimen 3C: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: cerebral cortex intermediate zone Present 3C
TS22: cerebral cortex marginal layer Present 3C
TS22: cortical plate Present 3C
TS22: lateral ganglionic eminence mantle zone Present 3C
Specimen 3C': embryonic day 14.0; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS22: lateral ganglionic eminence Strong 3C'
TS22: cerebral cortex marginal layer Present 3C'
TS22: cortical plate Present Regionally restricted 3C' Expression is absent in the lower part.
Specimen 3D: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: cerebral cortex intermediate zone Present 3D
TS22: cerebral cortex marginal layer Present 3D
TS22: cortical plate Present 3D
TS22: lateral ganglionic eminence mantle zone Present 3D
Specimen 3D': embryonic day 14.0; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS22: lateral ganglionic eminence Strong 3D'
TS22: cerebral cortex marginal layer Present 3D'
TS22: cortical plate Present Regionally restricted 3D' Expression is absent in the lower part.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory