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Gene Expression Data
Assay Details
Assay
Reference: J:106423 Dessaud E, et al., Identification of lynx2, a novel member of the ly-6/neurotoxin superfamily, expressed in neuronal subpopulations during mouse development. Mol Cell Neurosci. 2006 Feb;31(2):232-42
Assay type: RNA in situ
MGI Accession ID: MGI:7615229
Gene symbol: Lypd1
Gene name: Ly6/Plaur domain containing 1
Probe: Lynx2 cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 2A: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: 1st branchial arch Present 2A
TS17: 2nd branchial arch Present 2A
TS17: 3rd branchial arch Present 2A
TS17: neural tube Present Regionally restricted 2A Expression is in the cervical neural tube.

Specimen 2D: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: 2nd branchial arch Present 2D
TS17: facial ganglion Present 2D
TS17: glossopharyngeal ganglion Present 2D
TS17: vagus ganglion Present 2D
TS17: acoustic ganglion Absent
TS17: trigeminal ganglion Absent

Specimen 2G: embryonic day 10.5 (more )
Note: 38-somite stage
Structure Cell Type Level Pattern Image Note
TS17: neural tube spinal cord motor neuron Present 2G Expression is in motor neurons.
TS17: dorsal root ganglion Absent 2G

Specimen 2J: embryonic day 11.5 (more )
Structure Cell Type Level Pattern Image Note
TS19: hindbrain Present Regionally restricted 2J Expression is in the forming trigeminal (V) and ambiguus (IX/X) nuclei and in the lateral region.
TS19: neural tube spinal cord motor neuron Present Regionally restricted 2J Expression is in the ventro-lateral neural tube at the brachial level in motor neurons and in a few caudal cells.

Specimen 3A: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: paravertebral ganglion Present Regionally restricted 3A Expression is in the stellate ganglion.
TS20: cervical ganglion Present Regionally restricted 3A Expression is in the superior cervical ganglion.

Specimen 3C: embryonic day 12.5 (more )
Structure Cell Type Level Pattern Image Note
TS20: vagus ganglion neuron Present Single cells 3C Expression is in some neurons of the ganglion of the vagal (X) nerve.

Specimen 3E: embryonic day 12.5 (more )
Note: Double labeled: blue - Lypd1; brown - Isl1 (assay MGI:7615237) and Isl2 (assay MGI:7615238).
Structure Cell Type Level Pattern Image Note
TS20: glossopharyngeal ganglion sensory neuron Present Regionally restricted 3E Expression is in a subset of sensory neurons in cervical sensory ganglia.

Specimen 3F: embryonic day 12.5 (more )
Note: Double labeled: blue - Lypd1; brown - Isl1 (assay MGI:7615237) and Isl2 (assay MGI:7615238).
Structure Cell Type Level Pattern Image Note
TS20: sympathetic ganglion neuron Present Regionally restricted 3F Expression is in a subset of neurons.

Specimen 3G: embryonic day 12.5 (more )
Note: Double labeled: blue - Lypd1; brown - Isl1 (assay MGI:7615237) and Isl2 (assay MGI:7615238).
Structure Cell Type Level Pattern Image Note
TS20: dorsal root ganglion sensory neuron Present Single cells 3G Expression is in a few neurons, more strongly at rostral levels.

Specimen 4B: embryonic day 12.5 (more )
Note: Flat mount.
Structure Cell Type Level Pattern Image Note
TS20: glossopharyngeal ganglion motor neuron Strong 4B
TS20: trigeminal ganglion motor neuron Strong 4B
TS20: vagus ganglion motor neuron Strong 4B
TS20: spinal cord interneuron Present Regionally restricted 4B Expression is in a subpopulation of dorsal interneurons all along the rostro-caudal axis of the spinal cord.
TS20: spinal cord thoracic region spinal cord motor neuron Present Regionally restricted 4B Expression is in motor neurons of the most caudal part of the thoracic spinal cord.
TS20: spinal cord brachial region spinal cord motor neuron Present 4B Expression is in motor neurons.
TS20: spinal cord lumbar region spinal cord motor neuron Present 4B Expression is in motor neurons.
TS20: brainstem nucleus Weak Regionally restricted 4B Expression is in the oculomotor (III), the trochlear (IV), the facial (VII) and the hypoglossal (XII) nuclei.

Specimen 4F: embryonic day 12.5 (more )
Structure Cell Type Level Pattern Image Note
TS20: spinal cord brachial region spinal cord motor neuron Present 4F Expression is in brachial motor neurons.
TS20: spinal cord interneuron Present Regionally restricted 4F Expression is in both ventral and dorsal interneurons.

Specimen 4G: embryonic day 12.5 (more )
Note: Double labeled: blue - Lypd1; red - Phox2a (assay MGI:7615239).
Structure Cell Type Level Pattern Image Note
TS20: spinal cord interneuron Present Regionally restricted 4G Expression is lateral in dI5 interneurons.

Specimen 5A: postnatal day 14 (more )
Structure Level Pattern Image Note
TS28: dentate gyrus Present 5A
TS28: hippocampus CA1 Present 5A

Specimen 5D: postnatal day 14 (more )
Structure Cell Type Level Pattern Image Note
TS28: cerebellum granule cell layer Present Single cells 5D
TS28: cerebellum Purkinje cell layer Present Single cells 5D Expression is in distinct cells and is absent in the Purkinje cells.
TS28: cerebellum Purkinje cell layer Purkinje cell Absent 5D Expression is in distinct cells and is absent in the Purkinje cells.

Specimen 5G: postnatal day 14 (more )
Structure Cell Type Level Pattern Image Note
TS28: cortical layer IV neuron Present Single cells 5G Expression is in some projection neurons.
TS28: cortical layer V neuron Present Single cells 5G Expression is in some projection neurons.

Specimen 6J: embryonic day 12.5 (more )
Note: Double labeled: blue - Lypd1; brown - Nefm (assay MGI:7615242).
Structure Level Pattern Image Note
TS20: hand Present Regionally restricted 6J Expression is at the base of the forming digits.

Specimen 6L: embryonic day 12.5; Mettm1Cpo/Mettm1Cpo (more )
Structure Level Pattern Image Note
TS20: hand Present 6L Expression in this mutant is the same as in wild-type.

Specimen not shown E9.5: embryonic day 9.5; Mettm1Cpo/Mettm1Cpo (more )
Structure Level Pattern Image Note
TS15: branchial arch Present

Specimen not shown E12.5: embryonic day 12.5; Mettm1Cpo/Mettm1Cpo (more )
Structure Level Pattern Image Note
TS20: facial ganglion Present
TS20: sympathetic nerve trunk Present Single cells Expression is in specific cells in the sympathetic trunk and pelvic ganglia.

Specimen not shown Adult: postnatal adult; Mettm1Cpo/Mettm1Cpo (more )
Structure Cell Type Level Pattern Image Note
TS28: somatic motor system motor neuron Present Expression is in somatic motor neurons.
TS28: spinal cord dorsal horn interneuron Present Expression is in some interneurons of the dorsal horn.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory