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Gene Expression Data
Assay Details
Assay
Reference: J:205051 Miller JA, et al., Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates. Development. 2013 Nov;140(22):4633-44
Assay type: RNA in situ
MGI Accession ID: MGI:7550841
Gene symbol: Sox11
Gene name: SRY (sex determining region Y)-box 11
Probe: Sox11_riboprobe2
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Data was from the Allen Brain Atlas (http://www.brain-map.org/).
Results
Specimen 1D: postnatal day 56 (more )
Note: Sections were fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: dentate gyrus subgranular zone Present 1D Sox11
TS28: lateral ventricle Present Regionally restricted 1D Sox11 Expression was enriched in the wall of the lateral ventricle.
TS28: rostral migratory stream Present 1D Sox11
Specimen 8B E18.5: embryonic day 18.5 (more )
Note: Sections were fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS26: dentate gyrus Present Diffuse 8B Sox11 E18.5
Specimen 8B P4: postnatal day 4 (more )
Note: Sections were fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: dentate gyrus Present Diffuse 8B Sox11 P4
Specimen 8B P14: postnatal day 14 (more )
Note: Sections were fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: dentate gyrus granule cell layer Present Regionally restricted 8B Sox11 P14 A robust dense labeling of the inner granule cell layer was noted.
Specimen 8B P28: postnatal day 28 (more )
Note: Sections were fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: dentate gyrus granule cell layer Present Regionally restricted 8B Sox11 P28 The thickness and labeling intensity in the inner granule cell layer decreased.
Specimen 8B P56: postnatal day 56 (more )
Note: Sections were fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: dentate gyrus granule cell layer Present Regionally restricted 8B Sox11 P56 The thickness and labeling intensity in the inner granule cell layer decreased.
Specimen S3: postnatal day 56 (more )
Note: Sections were fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: dentate gyrus subgranular zone Present S3-41_Sox11
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/14/2024
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