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Gene Expression Data
Assay Details
Assay
Reference: J:68840 Nakagawa Y, et al., Combinatorial expression patterns of LIM-homeodomain and other regulatory genes parcellate developing thalamus. J Neurosci. 2001 Apr 15;21(8):2711-25
Assay type: RNA in situ
MGI Accession ID: MGI:7524726
Gene symbol: Pax6
Gene name: paired box 6
Probe: Pax6 cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 2U: postnatal day 2 (more )
Structure Level Pattern Image Note
TS27: zona incerta Present Regionally restricted 2U Expression in rostral subdivision of zona incerta.
Specimen 2V: postnatal day 2 (more )
Structure Level Pattern Image Note
TS27: zona incerta Present Regionally restricted 2V Expression in rostral subdivision of zona incerta.
TS27: ventral lateral geniculate nucleus Present Regionally restricted 2V Expression in thin band in ventral lateral genicululate nucleus.
Specimen 2W: postnatal day 2 (more )
Structure Level Pattern Image Note
TS27: zona incerta Present Regionally restricted 2W Expression in rostral subdivision of zona incerta.
Specimen 2X: postnatal day 2 (more )
Structure Level Pattern Image Note
TS27: zona incerta Present Regionally restricted 2X Expression in ventral subdivision of zona incerta.
Specimen 5Q: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: zona limitans intrathalamica Present 5Q
Specimen 5R: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: ventral lateral geniculate nucleus Present Regionally restricted 5R Expression in a rostroventral part of ventral lateral geniculate nucleus.
Specimen 5S: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: zona incerta Present Regionally restricted 5S Expression in rostral subdivision of zona incerta.
Specimen 5T: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: zona incerta Present Regionally restricted 5T Expression in ventral subdivision of zona incerta.
Specimen 6M: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: zona limitans intrathalamica Present 6M
Specimen 6N: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: ventral lateral geniculate nucleus Present Regionally restricted 6N Expression in part of ventral lateral geniculate nucleus.
TS22: zona incerta Present Regionally restricted 6N Expression rostral subdivision of zona incerta.
Specimen 6O: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: zona incerta Present Regionally restricted 6O Expression rostral subdivision of zona incerta.
Specimen 6P: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: zona incerta Present Regionally restricted 6P Expression ventral subdivision of zona incerta.
Specimen 7J: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: thalamus Present Regionally restricted 7J present / RR Domain expressing Lhx1, Isl1 and Pax6 but not Lhx5. Expression in putative ventral lateral geniculate nucleus.
Specimen 7K: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: thalamus Present Regionally restricted 7K At more caudal level, thalamocortical axon bundle does not express Pax6. At most caudal level, domain of expression in ventral lateral geniculate nucleus
Specimen 8I: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: diencephalon Present Regionally restricted 8I Expression in ventral thalamus.
TS17: diencephalon mantle layer Present Regionally restricted 8I
TS17: diencephalon ventricular layer Present Regionally restricted 8I
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory