Isl1 RNA in situ Gene Expression Assay

Gene Expression Data
Assay Details

Assay

Reference:	J:68840 Nakagawa Y, et al., Combinatorial expression patterns of LIM-homeodomain and other regulatory genes parcellate developing thalamus. J Neurosci. 2001 Apr 15;21(8):2711-25
Assay type:	RNA in situ
MGI Accession ID:	MGI:7524725
Gene symbol:	Isl1
Gene name:	ISL1 transcription factor, LIM/homeodomain

Probe:	Isl1 cDNA
Probe preparation:	Antisense labelled with digoxigenin RNA

Results

2Q ©

Specimen 2Q: postnatal day 2 (more

)

Structure	Level	Pattern	Image	Note
TS27: reticular thalamic nucleus	Present		2Q
TS27: zona incerta	Present	Regionally restricted	2Q	Expression in rostral subdivision of zona incerta.

2R ©

Specimen 2R: postnatal day 2 (more

)

Structure	Level	Pattern	Image	Note
TS27: reticular thalamic nucleus	Present		2R
TS27: zona incerta	Present	Regionally restricted	2R	Expression in rostral subdivision of zona incerta.
TS27: ventral lateral geniculate nucleus	Trace	Regionally restricted	2R	Possibly expressed in a very small, ventromedial part of ventral lateral geniculate nucleus.

2S ©

Specimen 2S: postnatal day 2 (more

)

Structure	Level	Pattern	Image	Note
TS27: reticular thalamic nucleus	Present		2S
TS27: zona incerta	Present	Regionally restricted	2S	Expression in rostral subdivision of zona incerta.

2T ©

Specimen 2T: postnatal day 2 (more

)

Structure	Level	Pattern	Image	Note
TS27: zona incerta	Present	Regionally restricted	2T	Expression in ventral subdivision of zona incerta.

5M ©

Specimen 5M: embryonic day 16.5 (more

)

Structure	Level	Pattern	Image	Note
TS24: reticular thalamic nucleus	Present		5M

5N ©

Specimen 5N: embryonic day 16.5 (more

)

Structure	Level	Pattern	Image	Note
TS24: reticular thalamic nucleus	Present		5N
TS24: zona incerta	Present	Regionally restricted	5N	Expression in rostral subdivision of zona incerta.
TS24: ventral lateral geniculate nucleus	Present	Regionally restricted	5N	Possible expression in small, rostroventral part of ventral lateral geniculate nucleus.

5O ©

Specimen 5O: embryonic day 16.5 (more

)

Structure	Level	Pattern	Image	Note
TS24: reticular thalamic nucleus	Present		5O
TS24: zona incerta	Present	Regionally restricted	5O	Expression in rostral subdivision of zona incerta.

5P ©

Specimen 5P: embryonic day 16.5 (more

)

Structure	Level	Pattern	Image	Note
TS24: zona incerta	Present	Regionally restricted	5P	Expression in ventral subdivision of zona incerta.

6I ©

Specimen 6I: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS22: reticular thalamic nucleus	Present		6I

6J ©

Specimen 6J: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS22: reticular thalamic nucleus	Present		6J
TS22: ventral lateral geniculate nucleus	Present	Regionally restricted	6J	Expression domain appears to extend dorsally to ventral part of ventral lateral geniculate nucleus.
TS22: zona incerta	Present	Regionally restricted	6J	Expression in rostral subdivision of zona incerta.

6K ©

Specimen 6K: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS22: reticular thalamic nucleus	Present		6K
TS22: zona incerta	Present	Regionally restricted	6K	Expression in rostral subdivision of zona incerta.

6L ©

Specimen 6L: embryonic day 14.5 (more

)

Structure	Level	Pattern	Image	Note
TS22: zona incerta	Present	Regionally restricted	6L	Expression in ventral subdivision of zona incerta.

7G ©

7G' ©

Specimen 7G: embryonic day 12.5 (more

)

Structure	Level	Pattern	Image	Note
TS20: thalamus	Present	Regionally restricted	7G , 7G'	Expression in cells in medioventral part of thalamocortical axon bundle.

7H ©

7H' ©

Specimen 7H: embryonic day 12.5 (more

)

Structure	Level	Pattern	Image	Note
TS20: thalamus	Present	Regionally restricted	7H , 7H'	Domain continues caudally to putative reticular nucleus. Domain expressing Lhx1, Isl1 and Pax6 but not Lhx5.
TS20: zona limitans intrathalamica	Absent		7H' , 7H

7I ©

Specimen 7I: embryonic day 12.5 (more

)

Structure	Level	Pattern	Image	Note
TS20: thalamus	Present		7I

8H ©

Specimen 8H: embryonic day 10.5 (more

)

Structure	Level	Pattern	Image	Note
TS17: diencephalon	Present	Regionally restricted	8H	Expression in ventral thalamus.
TS17: diencephalon mantle layer	Present	Regionally restricted	8H

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