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Gene Expression Data
Assay Details
Assay
Reference: J:186285 Lefkovics K, et al., Comparative analysis of type II classic cadherin mRNA distribution patterns in the developing and adult mouse somatosensory cortex and hippocampus suggests significant functional redundancy. J Comp Neurol. 2012 May 1;520(7):1387-1405
Assay type: RNA in situ
MGI Accession ID: MGI:7492301
Gene symbol: Cdh22
Gene name: cadherin 22
Probe: Cdh22 cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Using another probe (MGI:6169485) based on the Allen Brain Atlas probe information showed identical expression pattern.
Results
Specimen 3P: postnatal adult (more )
Structure Level Pattern Image Note
TS28: somatosensory cortex Present 3P
Specimen 5M: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: hippocampus Present Regionally restricted 5M Expressed in the preplate. Summarized in Table 3.
Specimen 5N: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: hippocampus Present Regionally restricted 5N Expressed in the hippocampal plate and the subplate. Summarized in Table 3.
Specimen 5O: postnatal day 1 (more )
Structure Cell Type Level Pattern Image Note
TS27: hippocampus CA3 hippocampal pyramidal neuron Strong 5O
TS27: CA1 pyramidal cell layer Weak 5O
TS27: dentate gyrus hilus Present 5O Summarized in Table 3.
TS27: hippocampus molecular layer Present 5O Summarized in Table 3.
TS27: hippocampus stratum lacunosum Present 5O Summarized in Table 3.
TS27: hippocampus stratum oriens Present 5O Summarized in Table 3.
TS27: hippocampus stratum radiatum Present 5O Summarized in Table 3.
Specimen 7E1: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: hippocampus stratum oriens Present Scattered 7E1 Expressed in a large number of cells.
TS28: CA1 pyramidal cell layer Strong 7E1
TS28: hippocampus stratum radiatum Present 7E1
Specimen 7E2: postnatal adult (more )
Structure Level Pattern Image Note
TS28: hippocampus stratum oriens Present Scattered 7E2 Expressed in a large number of cells.
TS28: CA1 pyramidal cell layer Strong 7E2
TS28: hippocampus stratum radiatum Absent 7E2
Specimen 7E3: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: CA3 pyramidal cell layer Strong 7E3
TS28: hippocampus stratum lucidum Present 7E3
Specimen 7E4: postnatal adult (more )
Structure Level Pattern Image Note
TS28: CA3 pyramidal cell layer Strong 7E4
TS28: hippocampus stratum lucidum Present 7E4
Specimen 7E5: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: dentate gyrus granule cell layer Strong 7E5
TS28: dentate gyrus hilus Present 7E5
Specimen 7E6: postnatal adult (more )
Structure Level Pattern Image Note
TS28: dentate gyrus granule cell layer Strong 7E6
TS28: dentate gyrus hilus Present 7E6
TS28: dentate gyrus molecular layer Present Regionally restricted 7E6 Expressed in cells close to the granule cell layer.
Specimen 8K: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: hippocampus stratum radiatum Present 8K Also expressed in cells on the stratum radiatum-stratum lacunosum-moleculare border.
Specimen 10E1: embryonic day 14.0 (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS22: cerebral cortex intermediate zone Absent 10E1
TS22: cerebral cortex marginal layer Absent 10E1
TS22: cerebral cortex subventricular zone Absent 10E1
TS22: cerebral cortex ventricular layer Absent 10E1
TS22: cortical plate Absent 10E1
TS22: cortical subplate Absent 10E1
Specimen 10E2: embryonic day 16.0 (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS24: cerebral cortex marginal layer Absent 10E2
TS24: cortical plate Absent 10E2
TS24: cortical subplate Absent 10E2
TS24: cerebral cortex intermediate zone Present 10E2
TS24: cerebral cortex subventricular zone Present 10E2
TS24: cerebral cortex ventricular layer Present 10E2
Specimen 10E3: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: cerebral cortex ventricular layer Absent 10E3
Specimen 10E4: postnatal day 1 (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS27: cerebral cortex intermediate zone Absent 10E4
TS27: cortical layer I Absent 10E4
TS27: cortical layer VI Absent 10E4
TS27: cortical layer II Present 10E4
TS27: cortical layer III Present 10E4
TS27: cortical layer IV Present 10E4
TS27: cortical layer V Present 10E4
TS27: cortical subplate Present 10E4
Specimen 10E5: postnatal day 10 (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS28: cerebral hemisphere white matter Absent 10E5
TS28: cortical layer I Absent 10E5
TS28: cortical layer II Present 10E5
TS28: cortical layer III Present 10E5
TS28: cortical layer IV Present 10E5
TS28: cortical layer V Present 10E5
TS28: cortical layer VI Present 10E5
TS28: cortical subplate Present 10E5
Specimen 10E6: postnatal adult (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS28: cerebral hemisphere white matter Absent 10E6
TS28: cortical layer I Absent 10E6
TS28: cortical layer II Present 10E6
TS28: cortical layer III Present 10E6
TS28: cortical layer IV Present 10E6
TS28: cortical layer V Present 10E6
TS28: cortical layer VI Present 10E6
TS28: cortical subplate Present 10E6
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
MGI 6.23 		The Jackson Laboratory