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Gene Expression Data
Assay Details
Assay
Reference: J:186285 Lefkovics K, et al., Comparative analysis of type II classic cadherin mRNA distribution patterns in the developing and adult mouse somatosensory cortex and hippocampus suggests significant functional redundancy. J Comp Neurol. 2012 May 1;520(7):1387-1405
Assay type: RNA in situ
MGI Accession ID: MGI:7492293
Gene symbol: Cdh10
Gene name: cadherin 10
Probe: Cdh10 cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Using another probe (MGI:6169467) based on the Allen Brain Atlas probe information showed identical expression pattern.
Results
Specimen 3F: postnatal adult (more )
Structure Level Pattern Image Note
TS28: somatosensory cortex Present 3F
Specimen 4M: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: hippocampus Absent 4M Summarized in Table 3.
Specimen 4N: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: dentate gyrus Present Regionally restricted 4N Expressed in the dentate marginal zone and hilus. Summarized in Table 3. Weak expression in the ventricular zone.
TS24: hippocampus Present Regionally restricted 4N Expressed in the subplate, the marginal zone and the hippocampal plate. Summarized in Table 3.
TS24: hippocampus ventricular layer Present 4N
Specimen 4O: postnatal day 1 (more )
Structure Cell Type Level Pattern Image Note
TS27: CA1 pyramidal cell layer Strong 4O
TS27: hippocampus CA3 hippocampal pyramidal neuron Weak 4O
TS27: dentate gyrus granule cell layer Present 4O Summarized in Table 3.
TS27: dentate gyrus hilus Present 4O Summarized in Table 3.
TS27: hippocampus stratum lucidum Present 4O Summarized in Table 3.
TS27: hippocampus stratum oriens Present 4O Summarized in Table 3.
TS27: hippocampus stratum radiatum Present 4O Summarized in Table 3.
Specimen 6E1: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: hippocampus stratum oriens Present Scattered 6E1 Expressed in a large number of cells.
TS28: CA1 pyramidal cell layer Strong 6E1
TS28: hippocampus molecular layer Present 6E1
TS28: hippocampus stratum lacunosum Present 6E1
TS28: hippocampus stratum radiatum Present 6E1
Specimen 6E2: postnatal adult (more )
Structure Level Pattern Image Note
TS28: hippocampus stratum oriens Present Scattered 6E2 Expressed in a large number of cells.
TS28: CA1 pyramidal cell layer Strong 6E2
TS28: hippocampus molecular layer Absent 6E2
TS28: hippocampus stratum lacunosum Absent 6E2
TS28: hippocampus stratum radiatum Absent 6E2
Specimen 6E3: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: CA3 pyramidal cell layer Strong 6E3
TS28: hippocampus stratum lucidum Present 6E3
Specimen 6E4: postnatal adult (more )
Structure Level Pattern Image Note
TS28: CA3 pyramidal cell layer Strong 6E4
TS28: hippocampus stratum lucidum Present 6E4
Specimen 6E5: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: dentate gyrus granule cell layer Weak 6E5
TS28: dentate gyrus hilus Present 6E5
TS28: dentate gyrus molecular layer Present Regionally restricted 6E5 Expressed in cells close to the granule cell layer.
Specimen 6E6: postnatal adult (more )
Structure Level Pattern Image Note
TS28: dentate gyrus granule cell layer Weak 6E6
TS28: dentate gyrus hilus Present 6E6
Specimen 8E: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: hippocampus molecular layer Present 8E
TS28: hippocampus stratum lacunosum Present 8E
TS28: hippocampus stratum radiatum Present 8E
Specimen 9E1: embryonic day 14.0 (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS22: cerebral cortex intermediate zone Absent 9E1
TS22: cerebral cortex marginal layer Absent 9E1
TS22: cerebral cortex subventricular zone Absent 9E1
TS22: cerebral cortex ventricular layer Absent 9E1
TS22: cortical plate Present 9E1
TS22: cortical subplate Present 9E1
Specimen 9E2: embryonic day 16.0 (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS24: cerebral cortex subventricular zone Present 9E2
TS24: cortical plate Present 9E2
TS24: cortical subplate Present 9E2
TS24: cerebral cortex intermediate zone Absent 9E2
TS24: cerebral cortex marginal layer Absent 9E2
TS24: cerebral cortex ventricular layer Absent 9E2
Specimen 9E3: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: cerebral cortex subventricular zone Absent 9E3
TS26: cerebral cortex ventricular layer Absent 9E3
Specimen 9E4: postnatal day 1 (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS27: cerebral cortex intermediate zone Absent 9E4
TS27: cortical layer I Present 9E4
TS27: cortical layer II Present 9E4
TS27: cortical layer III Present 9E4
TS27: cortical layer IV Present 9E4
TS27: cortical layer V Present 9E4
TS27: cortical layer VI Present 9E4
TS27: cortical subplate Present 9E4
Specimen 9E5: postnatal day 10 (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS28: cortical layer I Present 9E5
TS28: cortical layer II Present 9E5
TS28: cortical layer III Present 9E5
TS28: cortical layer IV Present 9E5
TS28: cortical layer V Present 9E5
TS28: cortical layer VI Present 9E5
TS28: cortical subplate Present 9E5
TS28: cerebral hemisphere white matter Absent 9E5
Specimen 9E6: postnatal adult (more )
Note: Summarized in Fig. 11.
Structure Level Pattern Image Note
TS28: cerebral hemisphere white matter Absent 9E6
TS28: cortical layer I Absent 9E6
TS28: cortical layer II Present 9E6
TS28: cortical layer III Present 9E6
TS28: cortical layer IV Present 9E6
TS28: cortical layer V Present 9E6
TS28: cortical layer VI Present 9E6
TS28: cortical subplate Present 9E6
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/16/2024
MGI 6.23 		The Jackson Laboratory