Gene Expression Data
Assay Details
|
Assay
|
|
Reference:
|
J:330741
Orchard P, et al., Genome-wide chromatin accessibility and transcriptome profiling show minimal epigenome changes and coordinated transcriptional dysregulation of hedgehog signaling in Danforth's short tail mice. Hum Mol Genet. 2019 Mar 1;28(5):736-750
|
|
Assay type:
|
RNA in situ
|
|
MGI Accession ID:
|
MGI:7491665
|
|
Gene symbol:
|
Foxa1
|
|
Gene name:
|
forkhead box A1
|
|
Probe:
|
Foxa1 probe
|
|
Probe preparation:
|
Antisense labelled with digoxigenin RNA
|
|
|
Results
|
Specimen
3D:
embryonic day 9.5
(more  )
Specimen
3D:
(close  )
|
Genetic Background:
|
involves: CD-1 * Danforth's posterior duplication stock
|
|
Age:
|
embryonic day 9.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS15: tail |
Present |
|
3D
|
|
Specimen
3E:
embryonic day 9.5; Etn2Sd/Etn2 +
(more )
Specimen
3E:
(close )
|
Genetic Background:
|
involves: CD-1 * Danforth's posterior duplication stock * SD
|
|
Mutant Allele(s):
|
Etn2Sd/Etn2+
|
|
Age:
|
embryonic day 9.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS15: tail |
Weak |
|
3E
|
|
Specimen
3F:
(close )
|
Genetic Background:
|
involves: CD-1 * Danforth's posterior duplication stock * SD
|
|
Mutant Allele(s):
|
Etn2Sd/Etn2Sd
|
|
Age:
|
embryonic day 9.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS15: tail |
Trace |
|
3F
|
|
|
Analysis Tools
