Gene Expression Data
Assay Details
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Assay
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Reference:
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J:330741
Orchard P, et al., Genome-wide chromatin accessibility and transcriptome profiling show minimal epigenome changes and coordinated transcriptional dysregulation of hedgehog signaling in Danforth's short tail mice. Hum Mol Genet. 2019 Mar 1;28(5):736-750
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:7491655
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Gene symbol:
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T
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Gene name:
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brachyury, T-box transcription factor T
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Probe:
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T probe6
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Results
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Specimen
3J:
embryonic day 9.5
(more  )
Specimen
3J:
(close  )
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Genetic Background:
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involves: CD-1 * Danforth's posterior duplication stock
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Specimen
3K:
embryonic day 9.5; Etn2Sd/Etn2 +
(more )
Specimen
3K:
(close )
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Genetic Background:
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involves: CD-1 * Danforth's posterior duplication stock * SD
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Mutant Allele(s):
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Etn2Sd/Etn2+
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Specimen
3L:
(close )
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Genetic Background:
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involves: CD-1 * Danforth's posterior duplication stock * SD
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Mutant Allele(s):
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Etn2Sd/Etn2Sd
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: tail |
Present |
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3L
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Expression in this mutant was the same as in wild-type.
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| TS15: notochord |
Present |
Non-Uniform |
3L
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In this mutant there is reduced expression in the more anterior part of the notochord compared to wild-type.
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Analysis Tools
