About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:316150 Li R, et al., A distinct response to endogenous DNA damage in the development of Nbs1-deficient cortical neurons. Cell Res. 2012 May;22(5):859-72
Assay type: Immunohistochemistry
MGI Accession ID: MGI:7448692
Gene symbol: Rbfox3
Gene name: RNA binding protein, fox-1 homolog (C. elegans) 3
Antibody: anti-NeuN
Detection system: Secondary antibody
Results
Specimen 1B CNS-ctr: postnatal day 21; Nbntm2Zqw/Nbntm2Zqw (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Present 1B CNS-ctr
TS28: corpus callosum Present 1B CNS-ctr
TS28: fasciola cinereum Present 1B CNS-ctr
TS28: hypothalamus Present 1B CNS-ctr
TS28: medial habenular nucleus Present 1B CNS-ctr
TS28: thalamus Present 1B CNS-ctr

Specimen 1B CNS-del: postnatal day 21; Nbntm2Zqw/Nbntm2Zqw, Tg(Nes-cre)1Wme/0 (more )
Note: Conditional mutant.
Structure Level Pattern Image Note
TS28: cerebral cortex Present 1B CNS-del Authors report ~20% reduction in thickness of cerebral cortex compared to littermate control.
TS28: corpus callosum Present 1B CNS-del Thickness of corpus callosum markedly reduced compared to control.
TS28: medial habenular nucleus Present 1B CNS-del Dramatic reduction in number of neurons compared to control.
TS28: fasciola cinereum Present 1B CNS-del Mild alteration of fasciola cinereum compared to control.
TS28: hypothalamus Present 1B CNS-del Size of thalamic and hypothalamic regions proportionately reduced compared to control.
TS28: thalamus Present 1B CNS-del Size of thalamic and hypothalamic regions proportionately reduced compared to control.

Specimen 1C CNS-ctr: postnatal day 21; Nbntm2Zqw/Nbntm2Zqw (more )
Structure Cell Type Level Pattern Image Note
TS28: cortical layer I Cajal-Retzius cell Absent 1C CNS-ctr
TS28: cortical layer II pyramidal neuron Present 1C CNS-ctr Expression in small pyramidal cells.
TS28: cortical layer III pyramidal neuron Present 1C CNS-ctr Expression in small pyramidal cells.
TS28: cortical layer IV cortical granule cell Present 1C CNS-ctr
TS28: cortical layer V pyramidal neuron Present 1C CNS-ctr Expression in large pyramidal cells.
TS28: cortical layer VI Present 1C CNS-ctr Expression in polymorphic cells.

Specimen 1C CNS-del: postnatal day 21; Nbntm2Zqw/Nbntm2Zqw, Tg(Nes-cre)1Wme/0 (more )
Note: Conditional mutant.
Structure Level Pattern Image Note
TS28: cortical layer I Absent 1C CNS-del Thickness of layer I similar to that of control.
TS28: cortical layer II Present 1C CNS-del Thickness of layer II/III reduced ~76% compared to control.
TS28: cortical layer III Present 1C CNS-del Thickness of layer II/III reduced ~76% compared to control.
TS28: cortical layer IV Present 1C CNS-del Thickness and cellularity decreased ~78% compared to control.
TS28: cortical layer V Present 1C CNS-del Thickness and cellularity decreased ~78% compared to control.
TS28: cortical layer VI Present 1C CNS-del Similar number of cells compared to control.

Specimen 1E NeuN CNS-ctr: postnatal day 21; Nbntm2Zqw/Nbntm2Zqw (more )
Structure Level Pattern Image Note
TS28: dentate gyrus Present 1E NeuN CNS-ctr
TS28: hippocampus CA1 Present 1E NeuN CNS-ctr
TS28: hippocampus CA3 Present 1E NeuN CNS-ctr

Specimen 1E NeuN CNS-del: postnatal day 21; Nbntm2Zqw/Nbntm2Zqw, Tg(Nes-cre)1Wme/0 (more )
Note: Conditional mutant.
Structure Level Pattern Image Note
TS28: dentate gyrus Present 1E NeuN CNS-del Neurons in CA1, CA3 field and dentate gyrus less densely packed from P7 to P21.
TS28: hippocampus CA1 Present 1E NeuN CNS-del Neurons in CA1, CA3 field and dentate gyrus less densely packed from P7 to P21.
TS28: hippocampus CA3 Present 1E NeuN CNS-del Neurons in CA1, CA3 field and dentate gyrus less densely packed from P7 to P21.
TS28: dentate gyrus polymorphic layer Present 1E NeuN CNS-del Increased number of neurons compared to control.

Specimen S1A NeuN CNS-ctr: postnatal; Nbntm2Zqw/Nbntm2Zqw (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb Present S1A NeuN CNS-ctr

Specimen S1A NeuN CNS-del: postnatal; Nbntm2Zqw/Nbntm2Zqw, Tg(Nes-cre)1Wme/0 (more )
Note: Conditional mutant.
Structure Level Pattern Image Note
TS28: main olfactory bulb Present S1A NeuN CNS-del Authors report reduced cellularity and less defined laminar structure compared to control.

Specimen S1B NeuN CNS-ctr: postnatal day 7; Nbntm2Zqw/Nbntm2Zqw (more )
Structure Level Pattern Image Note
TS28: telencephalon subventricular zone Present Regionally restricted S1B NeuN CNS-ctr Expression in proliferating neuroprogenitors in SVZ of lateral ventricles.
TS28: rostral migratory stream Absent S1B NeuN CNS-ctr No expression in immature neurons in rostral migratory stream.

Specimen S1B NeuN CNS-del: postnatal day 7; Nbntm2Zqw/Nbntm2Zqw, Tg(Nes-cre)1Wme/0 (more )
Note: Conditional mutant.
Structure Level Pattern Image Note
TS28: telencephalon subventricular zone Present S1B NeuN CNS-del Proliferating neuroprogenitors in SVZ of lateral ventricles greatly reduced compared to control.
TS28: rostral migratory stream Absent S1B NeuN CNS-del No expression in immature neurons in rostral migratory stream.

Specimen S1C CNS-ctr: postnatal; Nbntm2Zqw/Nbntm2Zqw (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb Present S1C CNS-ctr

Specimen S1C CNS-del Trp53+/+: postnatal; Nbntm2Zqw/Nbntm2Zqw, Tg(Nes-cre)1Wme/0 (more )
Note: Conditional mutant.
Structure Level Pattern Image Note
TS28: main olfactory bulb Present S1C CNS-del;Trp53+/+

Specimen S1C CNS-del Trp53+/-: postnatal; Nbntm2Zqw/Nbntm2Zqw, Trp53tm1Brd/Trp53+, Tg(Nes-cre)1Wme/0 (more )
Note: Conditional mutant.
Structure Level Pattern Image Note
TS28: main olfactory bulb Present S1C CNS-del;Trp53+/- Authors report partial rescue of laminar structures

Specimen S1C CNS-del Trp53-/-: postnatal; Nbntm2Zqw/Nbntm2Zqw, Trp53tm1Brd/Trp53tm1Brd, Tg(Nes-cre)1Wme/0 (more )
Note: Conditional mutant.
Structure Cell Type Level Pattern Image Note
TS28: main olfactory bulb Present S1C CNS-del;Trp53-/- Authors report partial rescue of laminar structures
TS28: main olfactory bulb granule cell layer olfactory granule cell Present S1C CNS-del;Trp53-/- Number of granule cells increased compared to control.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/18/2025
MGI 6.24
The Jackson Laboratory