Gene Expression Data
Assay Details
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Assay
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Reference:
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J:80873
Asou Y, et al., Coordinated expression of scleraxis and Sox9 genes during embryonic development of tendons and cartilage. J Orthop Res. 2002 Jul;20(4):827-33
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:7432499
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Gene symbol:
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Scx
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Gene name:
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scleraxis scleraxis bHLH transcription factor
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Probe:
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Scleraxis cDNA
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Visualized with:
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Alkaline phosphatase
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Results
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Specimen
1a:
embryonic day 10.5
(more  )
Specimen
1a:
(close  )
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Genetic Background:
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ICR
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
1b:
embryonic day 11.5
(more )
Specimen
1b:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: sclerotome |
Present |
Regionally restricted |
1b
,
1c
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Expression is in the lateral part.
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Specimen
2a:
embryonic day 12.5
(more )
Specimen
2a:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
2c:
embryonic day 13.5
(more )
Specimen
2c:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 13.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS21: intercostal muscle |
Present |
Regionally restricted |
2c
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Expression is at the interface of the intercostal muscles and the surface of the rib primordia.
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| TS21: rib cartilage condensation |
Present |
Regionally restricted |
2c
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Expression is at the interface of the intercostal muscles and the surface of the rib primordia.
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Specimen
3a:
embryonic day 10.5
(more )
Specimen
3a:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS17: limb |
Present |
Regionally restricted |
3a
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Expression is in the medio-ventral and medio-dorsal part and is absent in the center.
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Specimen
3b:
embryonic day 11.5
(more )
Specimen
3b:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: limb mesenchyme |
Present |
Regionally restricted |
3b
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Expression is surrounding the skeletal primordia.
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Specimen
4a:
embryonic day 12.5
(more )
Specimen
4a:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 12.5
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Age Note:
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`
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: limb |
Present |
Regionally restricted |
4a
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Expression is along the proximo-distal axis starting from the muscle/tendon boundary towards the distal end of each digit.
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| TS20: limb digit |
Present |
Regionally restricted |
4a
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Expression is along the proximo-distal axis starting from the muscle/tendon boundary towards the distal end of each digit.
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| TS20: limb musculature |
Present |
Regionally restricted |
4a
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Expression is along the proximo-distal axis starting from the muscle/tendon boundary towards the distal end of each digit.
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| TS20: limb tendon primordium |
Present |
Regionally restricted |
4a
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Expression is along the proximo-distal axis starting from the muscle/tendon boundary towards the distal end of each digit.
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Specimen
4b:
embryonic day 12.5
(more )
Specimen
4b:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: embryo |
Present |
Regionally restricted |
4b
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Expression is in tissues attached to the ends of the appendicular skeleton.
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| TS20: skeleton |
Present |
Regionally restricted |
4b
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Expression is in tissues attached to the ends of the appendicular skeleton.
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| TS20: tendon |
Present |
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4b
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Specimen
5a:
embryonic day 13.5
(more )
Specimen
5a:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 13.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS21: phalanx pre-cartilage condensation |
Present |
Regionally restricted |
5a
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Expression is either ventral or dorsal in the distal and proximal part of each phalanx in regions where the putative flexor and extensor tendons are developing.
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Specimen
5b:
embryonic day 13.5
(more )
Specimen
5b:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 13.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
6a:
embryonic day 15.5
(more )
Specimen
6a:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 15.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
6b:
embryonic day 13.5
(more )
Specimen
6b:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 13.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
6c:
embryonic day 16.5
(more )
Specimen
6c:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 16.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS24: knee joint |
Present |
Regionally restricted |
6c
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Expression is in the collateral ligaments.
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| TS24: cruciate ligament of knee |
Present |
Regionally restricted |
6c
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Expression is in the anterior cruciate ligament.
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