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Gene Expression Data
Assay Details
Assay
Reference: J:99267 Vanhalst K, et al., delta-Protocadherins: a gene family expressed differentially in the mouse brain. Cell Mol Life Sci. 2005 Jun;62(11):1247-59
Assay type: RNA in situ
MGI Accession ID: MGI:7411318
Gene symbol: Pcdh11x
Gene name: protocadherin 11 X-linked
Probe: Pcdh11 probe1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Tissues were fixed and post-fixed in 4% formaldehyde.
Results
Specimen 4C: embryonic day 15.0 (more )
Structure Level Pattern Image Note
TS23: retina layer Present 4C
Specimen 4G: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: entorhinal cortex Present Regionally restricted 4G
TS27: hippocampus Present Regionally restricted 4G
TS27: insular cortex Present Regionally restricted 4G
TS27: occipital cortex Present Regionally restricted 4G
TS27: parietal cortex Present Regionally restricted 4G
TS27: piriform cortex Present Regionally restricted 4G
TS27: retrosplenial cortex Present Regionally restricted 4G
TS27: caudate-putamen Present Regionally restricted 4G Expression is in the matrix of different striatal regions.
TS27: olfactory tubercle Present Patchy 4G
Specimen 4K: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: caudate-putamen Present Regionally restricted 4K
TS27: entorhinal cortex Present Regionally restricted 4K
TS27: hippocampus Present Regionally restricted 4K
TS27: insular cortex Present Regionally restricted 4K
TS27: occipital cortex Present Regionally restricted 4K
TS27: parietal cortex Present Regionally restricted 4K
TS27: piriform cortex Present Regionally restricted 4K
TS27: retrosplenial cortex Present Regionally restricted 4K
TS27: diencephalon Present Regionally restricted 4K Expression is in brain nuclei.
TS27: amygdala Present Patchy 4K
Specimen 4O: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: caudate-putamen Present Regionally restricted 4O
TS27: entorhinal cortex Present Regionally restricted 4O
TS27: hippocampus Present Regionally restricted 4O
TS27: insular cortex Present Regionally restricted 4O
TS27: occipital cortex Present Regionally restricted 4O
TS27: parietal cortex Present Regionally restricted 4O
TS27: piriform cortex Present Regionally restricted 4O
TS27: retrosplenial cortex Present Regionally restricted 4O
TS27: diencephalon Present Regionally restricted 4O Expression is in brain nuclei.
TS27: midbrain Present Regionally restricted 4O Expression is in brain nuclei.
TS27: amygdala Present Patchy 4O
Specimen 5A: postnatal day 1 (more )
Structure Cell Type Level Pattern Image Note
TS27: globus pallidus neuron Strong 5A
TS27: caudate-putamen Present Regionally restricted 5A
TS27: entorhinal cortex Present Regionally restricted 5A
TS27: hippocampus Present Regionally restricted 5A
TS27: insular cortex Present Regionally restricted 5A
TS27: occipital cortex Present Regionally restricted 5A
TS27: parietal cortex Present Regionally restricted 5A
TS27: piriform cortex Present Regionally restricted 5A
TS27: retrosplenial cortex Present Regionally restricted 5A
TS27: diencephalon Present Regionally restricted 5A Expression is in brain nuclei.
TS27: amygdala Present Patchy 5A
TS27: olfactory tubercle Present Patchy 5A
Specimen 5B: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: caudate-putamen Present Regionally restricted 5B
TS27: entorhinal cortex Present Regionally restricted 5B
TS27: hippocampus Present Regionally restricted 5B
TS27: insular cortex Present Regionally restricted 5B
TS27: occipital cortex Present Regionally restricted 5B
TS27: parietal cortex Present Regionally restricted 5B
TS27: piriform cortex Present Regionally restricted 5B
TS27: retrosplenial cortex Present Regionally restricted 5B
TS27: diencephalon Present Regionally restricted 5B Expression is in brain nuclei.
TS27: amygdala Present Patchy 5B
TS27: olfactory tubercle Present Patchy 5B
Specimen 5C: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: caudate-putamen Present Regionally restricted 5C
TS27: entorhinal cortex Present Regionally restricted 5C
TS27: hippocampus Present Regionally restricted 5C
TS27: insular cortex Present Regionally restricted 5C
TS27: occipital cortex Present Regionally restricted 5C
TS27: parietal cortex Present Regionally restricted 5C
TS27: piriform cortex Present Regionally restricted 5C
TS27: retrosplenial cortex Present Regionally restricted 5C
TS27: diencephalon Present Regionally restricted 5C Expression is in brain nuclei.
TS27: amygdala Present Patchy 5C
TS27: olfactory tubercle Present Patchy 5C
Specimen 5D: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: caudate-putamen Present Regionally restricted 5D
TS27: entorhinal cortex Present Regionally restricted 5D
TS27: hippocampus Present Regionally restricted 5D
TS27: insular cortex Present Regionally restricted 5D
TS27: occipital cortex Present Regionally restricted 5D
TS27: parietal cortex Present Regionally restricted 5D
TS27: piriform cortex Present Regionally restricted 5D
TS27: retrosplenial cortex Present Regionally restricted 5D
TS27: diencephalon Present Regionally restricted 5D Expression is in brain nuclei.
TS27: midbrain Present Regionally restricted 5D Expression is in brain nuclei.
TS27: amygdala Present Patchy 5D
TS27: olfactory tubercle Present Patchy 5D
Specimen not shown: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: hindbrain Present Regionally restricted Expression is in brain nuclei.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/18/2025
MGI 6.24 		The Jackson Laboratory