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Gene Expression Data
Assay Details
Assay
Reference: J:329558 Liu W, et al., Expression of Calbindin-D28K in the Developing and Adult Mouse Cochlea. J Histochem Cytochem. 2022 Aug;70(8):583-596
Assay type: Immunohistochemistry
MGI Accession ID: MGI:7356365
Gene symbol: Calb1
Gene name: calbindin 1
Antibody: anti-Calbindin (D1I4Q) (13176)
Detection system: Secondary antibody coupled to Alexa Fluor 488
Results
Specimen 1A: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cochlea Present Regionally restricted 1A

Specimen 1B: embryonic day 16.5 (more )
Note: In apical turn of cochlea. Double labeled: green - Calb1; red - Sox2 (assay MGI:7356366).
Structure Level Pattern Image Note
TS24: greater epithelial ridge Present Regionally restricted 1B Expression in greater epithelial ridge localized in cytosol of columnar epithelial cells. No co-expression with Sox2.

Specimen 1C: embryonic day 16.5 (more )
Note: In middle turn of cochlea. Double labeled: green - Calb1; red - Sox2 (assay MGI:7356366).
Structure Cell Type Level Pattern Image Note
TS24: greater epithelial ridge Present 1C
TS24: organ of Corti cochlear inner hair cell Present 1C
TS24: cochlea interdental cell of cochlea Absent 1C Expression in interdental cells in inner sulcus.

Specimen 1D: embryonic day 16.5 (more )
Note: In middle turn of cochlea. Double labeled: green - Calb1; red - Sox2 (assay MGI:7356366).
Structure Cell Type Level Pattern Image Note
TS24: organ of Corti cochlear inner hair cell Present 1D Expression in cytosol of inner hair cells.
TS24: organ of Corti cochlear outer hair cell Absent 1D
TS24: organ of Corti Deiter's cell Absent 1D

Specimen 1E: embryonic day 16.5 (more )
Note: In medial turn of cochlea. Double labeled: green - Calb1; red - Sox2 (assay MGI:7356366).
Structure Cell Type Level Pattern Image Note
TS24: greater epithelial ridge Present Regionally restricted 1E
TS24: cochlear ganglion spiral ganglion neuron Absent 1E
TS24: vestibulocochlear nerve cochlear component Absent 1E No expression in glial cells of Rosenthal's canal.

Specimen 1F: embryonic day 18.5 (more )
Note: In apical turn of cochlea. Double labeled: green - Calb1; red - Sox2 (assay MGI:7356366).
Structure Cell Type Level Pattern Image Note
TS26: greater epithelial ridge Present Regionally restricted 1F
TS26: organ of Corti cochlear inner hair cell Absent 1F

Specimen 1G: embryonic day 18.5 (more )
Note: In middle turn of cochlea. Double labeled: green - Calb1; red - Sox2 (assay MGI:7356366).
Structure Cell Type Level Pattern Image Note
TS26: greater epithelial ridge Present Regionally restricted 1G
TS26: organ of Corti cochlear inner hair cell Present 1G
TS26: organ of Corti cochlear outer hair cell Absent 1G
TS26: cochlea interdental cell of cochlea Present 1G

Specimen 1H: embryonic day 18.5 (more )
Note: In middle turn of cochlea. Double labeled: green - Calb1; red - Myo7a (assay MGI:7356366).
Structure Cell Type Level Pattern Image Note
TS26: organ of Corti cochlear inner hair cell Present Regionally restricted 1H Expression throughout inner hair cell cytosol, including basal and apical regions. No co-localization with Myo7a.
TS26: organ of Corti cochlear outer hair cell Absent 1H

Specimen 1I: embryonic day 18.5 (more )
Note: In basal turn of cochlea. Double labeled: green - Calb1; red - Sox2 (assay MGI:7356366).
Structure Cell Type Level Pattern Image Note
TS26: organ of Corti cochlear inner hair cell Present 1I
TS26: organ of Corti cochlear outer hair cell Absent 1I
TS26: organ of Corti Deiter's cell Absent 1I

Specimen 2A: postnatal day 1 (more )
Note: In apical turn of cochlea.
Structure Cell Type Level Pattern Image Note
TS27: organ of Corti cochlear inner hair cell Present 2A Expression within cytoplasm and nucleus.
TS27: organ of Corti cochlear outer hair cell Present 2A Expression in 3 rows of outer hair cells.

Specimen 2B: postnatal day 1 (more )
Note: In middle turn of cochlea. Double labeled: green - Calb1; red - Sox2 (assay MGI:7356366).
Structure Cell Type Level Pattern Image Note
TS27: greater epithelial ridge Present Regionally restricted 2B
TS27: organ of Corti organ of Corti supporting cell Absent 2B No expression in a few columnar inner supporting cells located medial to inner hair cells.
TS27: cochlea interdental cell of cochlea Present 2B Expression maintained in interdental cells.

Specimen 2C: postnatal day 1 (more )
Note: Double labeled: green - Calb1; red - Myo7a (assay MGI:7356368).
Structure Cell Type Level Pattern Image Note
TS27: organ of Corti cochlear inner hair cell Present Regionally restricted 2C Expression in organ of Corti in both cytoplasm and nucleus of inner cells and outer hair cells, co-expressed with Myo7a
TS27: organ of Corti cochlear outer hair cell Present Regionally restricted 2C Expression in organ of Corti in both cytoplasm and nucleus of inner cells and outer hair cells, co-expressed with Myo7a

Specimen 2D/F: postnatal day 1 (more )
Note: Double labeled: green - Calb1; red - phalloidin.
Structure Cell Type Level Pattern Image Note
TS27: organ of Corti cochlear inner hair cell Present Regionally restricted 2D , 2F Expression in organ of Corti. Co-localization with phalloidin in cuticular plates of hair cells; no expression in stereociliary bundle of hair cells.
TS27: organ of Corti cochlear outer hair cell Present Regionally restricted 2D , 2F Expression in organ of Corti. Co-localization with phalloidin in cuticular plates of hair cells; no expression in stereociliary bundle of hair cells.

Specimen 2G/I: postnatal day 1 (more )
Note: Double labeled: green - Calb1; red - Tubb3 (assay MGI:7356369).
Structure Cell Type Level Pattern Image Note
TS27: cochlear ganglion spiral ganglion neuron Present Scattered 2I , 2G Expression in cytoplasm and nucleus of subpopulation of scattered spinal ganglion neurons. Co-expression with Tubb3 in in cytoplasm.

Specimen 3A: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: cochlea Present Regionally restricted 3A

Specimen 3B: postnatal day 5 (more )
Note: Double labeled: green - Calb1; red - Sox2 (assay MGI:7356366).
Structure Level Pattern Image Note
TS28: greater epithelial ridge Present 3B

Specimen 3C: postnatal day 5 (more )
Note: Double labeled: green - Calb1; red - phalloidin.
Structure Cell Type Level Pattern Image Note
TS28: organ of Corti cochlear inner hair cell Present Regionally restricted 3C Co-expressed with phalloidin in cuticular plates of hair cells. No expression in hair cell nuclei.
TS28: organ of Corti cochlear outer hair cell Present Regionally restricted 3C Co-expressed with phalloidin in cuticular plates of hair cells. No expression in hair cell nuclei.

Specimen 3D/F: postnatal day 5 (more )
Note: Double labeled: green - Calb1; red - Tubb3 (assay MGI:7356369).
Structure Cell Type Level Pattern Image Note
TS28: cochlear ganglion spiral ganglion neuron Present Regionally restricted 3D , 3F Expression in spinal ganglion neuron (SGN) somata, mostly co-expressed with Tubb3, and in nucleus of SGN not expressing Tubb3.

Specimen 3G: postnatal day 8 (more )
Structure Cell Type Level Pattern Image Note
TS28: cochlea interdental cell of cochlea Absent 3G

Specimen 3H: postnatal day 8 (more )
Note: Double labeled: green - Calb1; red - Sox2 (assay \Acc(MGI:73563686|)).
Structure Cell Type Level Pattern Image Note
TS28: greater epithelial ridge Present Regionally restricted 3H Expression restricted to apical and basal parts of greater epithelial ridge.
TS28: organ of Corti cochlear inner hair cell Present Regionally restricted 3H Expression co-localized with phalloidin in cuticular plates of hair cells.
TS28: organ of Corti cochlear outer hair cell Present Regionally restricted 3H Expression co-localized with phalloidin in cuticular plates of hair cells.
TS28: cochlea Present Regionally restricted 3H Expression in inner sulcus.

Specimen 3I: postnatal day 8 (more )
Structure Cell Type Level Pattern Image Note
TS28: cochlear ganglion spiral ganglion neuron Present Regionally restricted 3I Expression in spinal ganglion neuron somata and nuclei.

Specimen 4A/C: postnatal day 10 (more )
Note: Double labeled: green - Calb1; red - phalloidin.
Structure Cell Type Level Pattern Image Note
TS28: organ of Corti cochlear inner hair cell Present Regionally restricted 4C , 4A Expression co-localized with phalloidin in cuticular plates of hair cells.
TS28: organ of Corti cochlear outer hair cell Present Regionally restricted 4C , 4A Expression co-localized with phalloidin in cuticular plates of hair cells.
TS28: greater epithelial ridge Trace Regionally restricted 4C , 4A Expression limited to apical surface of residual greater epithelial ridge cells.

Specimen 4D/F: postnatal day 10 (more )
Note: Double labeled: green - Calb1; red - phalloidin.
Structure Cell Type Level Pattern Image Note
TS28: organ of Corti cochlear inner hair cell Present Regionally restricted 4F , 4D Expression co-localized with phalloidin in cuticular plates of hair cells. No expression in stereociliary bundles.
TS28: organ of Corti cochlear outer hair cell Present Regionally restricted 4F , 4D Expression co-localized with phalloidin in cuticular plates of hair cells. No expression in stereociliary bundles.
TS28: greater epithelial ridge Absent 4F , 4D Expression completely disappeared from greater epithelial ridge.

Specimen 5A/C: postnatal day 14 (more )
Note: Double labeled: green - Calb1; red - calmodulin.
Structure Cell Type Level Pattern Image Note
TS28: organ of Corti cochlear inner hair cell Present Regionally restricted 5A , 5C Co-expression with calmodulin in cytoplasm of hair cells. No expression in stereociliary bundles.
TS28: organ of Corti cochlear outer hair cell Present Regionally restricted 5A , 5C Co-expression with calmodulin in cytoplasm of hair cells. No expression in stereociliary bundles.

Specimen 5D/F: postnatal day 21 (more )
Note: Double labeled: green - Calb1; red - calmodulin.
Structure Cell Type Level Pattern Image Note
TS28: organ of Corti cochlear inner hair cell Present Regionally restricted 5D , 5F Co-expression with calmodulin in cytoplasm of hair cells. No expression in stereociliary bundles.
TS28: organ of Corti cochlear outer hair cell Present Regionally restricted 5D , 5F Co-expression with calmodulin in cytoplasm of hair cells. No expression in stereociliary bundles.

Specimen 6A/C: postnatal day 28 (more )
Note: Double labeled: green - Calb1; red - Myo7a (assay MGI:7356368).
Structure Cell Type Level Pattern Image Note
TS28: organ of Corti cochlear inner hair cell Present Regionally restricted 6C , 6A Co-expression with Myo7a in cytoplasm of hair cells.
TS28: organ of Corti cochlear outer hair cell Present Regionally restricted 6C , 6A Co-expression with Myo7a in cytoplasm of hair cells.

Specimen 6D/F: postnatal day 28 (more )
Note: Double labeled: green - Calb1; red - phalloidin.
Structure Cell Type Level Pattern Image Note
TS28: organ of Corti cochlear inner hair cell Present Regionally restricted 6F , 6D Co-expression with phaloidin in cuticular plates of hair cells.
TS28: organ of Corti cochlear outer hair cell Present Regionally restricted 6F , 6D Co-expression with phaloidin in cuticular plates of hair cells.

Specimen 6G/I: postnatal day 28 (more )
Note: Double labeled: green - Calb1; red - Tubb3 (assay MGI:7356369).
Structure Cell Type Level Pattern Image Note
TS28: cochlear ganglion spiral ganglion neuron Present Regionally restricted 6G , 6I Co-expression with Tubb3 in cytoplasm of some but not all spinal ganglion neurons.

Specimen 7A: postnatal day 28 (more )
Note: In middle turn of cochlea.
Structure Level Pattern Image Note
TS28: cochlea Present Regionally restricted 7A

Specimen 7D/F: postnatal day 28 (more )
Note: Double labeled: green - Calb1; red - calmodulin.
Structure Cell Type Level Pattern Image Note
TS28: organ of Corti cochlear inner hair cell Present Regionally restricted 7F , 7D Co-expression with calmodulin in cytoplasm of hair cells.
TS28: organ of Corti cochlear outer hair cell Present Regionally restricted 7F , 7D Co-expression with calmodulin in cytoplasm of hair cells.

Specimen 7G/I: postnatal day 28 (more )
Note: Double labeled: green - Calb1; red - calmodulin.
Structure Cell Type Level Pattern Image Note
TS28: cochlear ganglion spiral ganglion neuron Present Regionally restricted 7I , 7G Expression in a subpopulation of calmodulin-expressing spinal ganglion neuron somata


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last database update
05/07/2024
MGI 6.23
The Jackson Laboratory