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Gene Expression Data
Assay Details
Assay
Reference: J:282029 Ino H, Immunohistochemical characterization of the orphan nuclear receptor ROR alpha in the mouse nervous system. J Histochem Cytochem. 2004 Mar;52(3):311-23
Assay type: Immunohistochemistry
MGI Accession ID: MGI:7293319
Gene symbol: Rora
Gene name: RAR-related orphan receptor alpha
Antibody: anti-RORalpha (C-16) (sc-6062)
Detection system: Biotinylated secondary antibody/[Strept]avidin coupled to horseradish peroxidase
Results
Specimen 2A: postnatal adult (more )
Structure Cell Type Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Purkinje cell Strong 2A
TS28: cerebellum molecular layer Strong 2A
TS28: cerebellum granule cell layer Absent 2A

Specimen 2C: postnatal adult (more )
Structure Level Pattern Image Note
TS28: ventral posterior lateral thalamic nucleus Strong 2C
TS28: ventral posterior medial thalamic nucleus Strong 2C
TS28: reticular thalamic nucleus Absent 2C

Specimen 2E: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cortical layer IV Strong 2E

Specimen 3A: postnatal adult (more )
Structure Level Pattern Image Note
TS28: dorsal cochlear nucleus Strong Regionally restricted 3A Strong expression in superficial layer.

Specimen 3C: postnatal adult (more )
Structure Level Pattern Image Note
TS28: suprachiasmatic nucleus Moderate 3C

Specimen 3E: postnatal adult (more )
Structure Level Pattern Image Note
TS28: superior colliculus Moderate 3E
TS28: pineal gland Weak 3E

Specimen 3G: postnatal adult (more )
Structure Cell Type Level Pattern Image Note
TS28: retina retinal ganglion cell Present 3G
TS28: retina inner nuclear layer Present 3G

Specimen 6A: embryonic day 16.0 (more )
Structure Cell Type Level Pattern Image Note
TS24: cerebellum Purkinje cell Strong Regionally restricted 6A Expression in immature Purkinje cells with small to medium-sized nuclei, not yet arranged in a single layer.
TS24: cerebellum external granule cell layer Absent 6A

Specimen 6C: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: thalamus Strong 6C

Specimen 6E: postnatal day 0 (more )
Structure Cell Type Level Pattern Image Note
TS27: cerebellum Purkinje cell Strong Regionally restricted 6E Expression in immature Purkinje cells with small to medium-sized nuclei, not yet arranged in a single layer.
TS27: cerebellum external granule cell layer Absent 6E

Specimen 6F: postnatal day 7 (more )
Structure Cell Type Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Purkinje cell Present Regionally restricted 6F Expression in Purkinje cells with larger nuclei forming monolayer architecture.
TS28: cerebellum molecular layer Present Regionally restricted 6F Expression in cells with small nuclei in the vicinity of the Purkinje cell layer.
TS28: cerebellum granule cell layer Absent 6F

Specimen 6G: postnatal day 14 (more )
Structure Level Pattern Image Note
TS28: cerebellum molecular layer Present Widespread 6G Expression in increased number of cells spread over entire area of molecular layer.

Specimen 6H: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: cerebellum molecular layer Present Widespread 6H Expression in increased number of cells spread over entire area of molecular layer.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory