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Gene Expression Data
Assay Details
Assay
Reference: J:316176 Volker LA, et al., Comparative analysis of Neph gene expression in mouse and chicken development. Histochem Cell Biol. 2012 Mar;137(3):355-66
Assay type: RNA in situ
MGI Accession ID: MGI:7278813
Gene symbol: Kirrel3
Gene name: kirre like nephrin family adhesion molecule 3
Probe: Neph2 cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 1D: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: dermomyotome Present 1D Expressed in dorsal somites, limited in the rostral region.
TS15: 2nd branchial arch Present 1D
TS15: 3rd branchial arch Present 1D
TS15: Rathke's pouch Present 1D
TS15: mesonephros Present 1D
TS15: otocyst Present 1D

Specimen 1E: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: 2nd branchial arch Present 1E
TS17: 3rd branchial arch Present 1E
TS17: Rathke's pouch Present 1E
TS17: otocyst Present 1E
TS17: dermomyotome Present 1E Expressed in dorsal somites, limited in the rostral region.
TS17: mesonephros Ambiguous 1E The identity of this domain was unclear.

Specimen 1F: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: dermomyotome Present 1F Expression extended to the caudal somites.
TS19: Rathke's pouch Present 1F
TS19: footplate apical ectodermal ridge Present 1F
TS19: forelimb bud mesenchyme Present 1F
TS19: handplate apical ectodermal ridge Present 1F
TS19: hindlimb bud mesenchyme Present 1F
TS19: metencephalon basal plate Present Regionally restricted 1F Expressed in pons.
TS19: hindbrain Present Regionally restricted 1F Expressed in medulla oblongata.
TS19: axial skeleton Present Regionally restricted 1F Expressed in the primitive intervertebral discs.

Specimen 3A: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: footplate apical ectodermal ridge Present 3A
TS19: forelimb bud mesenchyme Present 3A
TS19: handplate apical ectodermal ridge Present 3A
TS19: hindlimb bud mesenchyme Present 3A

Specimen 3B: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: forelimb bud apical ectodermal ridge Present 3B
TS17: forelimb bud mesenchyme Absent 3B

Specimen 3C/D/E/F/G: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: neocortex Present 3D , 3C Expressed in superficial layers.
TS24: diencephalon Present 3C , 3E
TS24: pretectum Present 3E , 3C
TS24: thalamus Present Regionally restricted 3C , 3E Expressed in the intermediate tier and a small band of cells bordering the rostral part of the dorsal tier.
TS24: medulla oblongata Strong 3G , 3C
TS24: hindbrain Strong Regionally restricted 3F , 3G , 3C Expressed as an oblong area extending caudally into the spinal cord, and in the basal plates of rhombomeres at the rostral part of the ponto-medullary transition zone.
TS24: hypothalamus Present Regionally restricted 3F , 3C Expressed in the peduncular hypothalamus.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/21/2024
MGI 6.23
The Jackson Laboratory