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Gene Expression Data
Assay Details
Assay
Reference: J:312430 Fearnley S, et al., Spatiotemporal expression of IgLON family members in the developing mouse nervous system. Sci Rep. 2021 Oct 1;11(1):19536
Assay type: RNA in situ
MGI Accession ID: MGI:6864112
Gene symbol: Opcml
Gene name: opioid binding protein/cell adhesion molecule-like
Probe: Iglon1 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 1A: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cerebral cortex Present 1A
TS24: habenula Present 1A
TS24: thalamic nucleus Present 1A
Specimen 2A: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: olfactory epithelium Absent 2A
Specimen 2B: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: olfactory epithelium Present Uniform 2B
Specimen 2C: postnatal day 15 (more )
Structure Level Pattern Image Note
TS28: olfactory epithelium Absent 2C
Specimen 3A: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: main olfactory bulb mitral cell layer Present 3A
Specimen 3B: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: main olfactory bulb mitral cell layer Present 3B
Specimen 3C: postnatal day 15 (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb mitral cell layer Present 3C
Specimen 4A: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cortical plate Present Widespread 4A
Specimen 4B: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: cortical plate Present Regionally restricted 4B Expression was higher in the apical region.
Specimen 4C: postnatal day 15 (more )
Structure Level Pattern Image Note
TS28: cortical layer II Weak 4C
TS28: cortical layer III Weak 4C
TS28: cortical layer V Weak 4C
TS28: cortical layer VI Weak 4C
Specimen 5A: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: medial habenular nucleus Present 5A
TS24: thalamic nucleus Present Regionally restricted 5A Expression was detected in the ventral anterolateral thalamic nucleus, and the laterodorsal thalamic nucleus.
Specimen 5B: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: medial habenular nucleus Present 5B
TS27: thalamic nucleus Present Regionally restricted 5B Expression was detected in the ventral anterolateral thalamic nucleus, the laterodorsal thalamic nucleus, the central posteromedial thalamic nucleus, and central medial thalamic nucleus.
Specimen 5C: postnatal day 15 (more )
Structure Level Pattern Image Note
TS28: medial habenular nucleus Present 5C
TS28: anterior ventral thalamic nucleus Present 5C Expression was detected in the ventral anterolateral thalamic nucleus, and the laterodorsal thalamic nucleus.
TS28: lateral dorsal thalamic nucleus Present 5C Expression was detected in the ventral anterolateral thalamic nucleus, and the laterodorsal thalamic nucleus.
Specimen 6A: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: hippocampal formation Present 6A
Specimen 6B: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: dentate gyrus Present 6B
TS27: hippocampus CA1 Present 6B
TS27: hippocampus CA3 Present 6B
Specimen 6C: postnatal day 15 (more )
Structure Level Pattern Image Note
TS28: dentate gyrus Present 6C
TS28: hippocampus CA1 Present 6C
TS28: hippocampus CA3 Strong 6C
Specimen 7A: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: cerebellum Purkinje cell layer Weak 7A
Specimen 7B: postnatal day 15 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Weak 7C , 7B
Specimen 8A: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: spinal cord gray matter Present Widespread 8A
TS27: dorsal root ganglion Present 8A Expression was in the majority of neurons.
Specimen 8B: postnatal day 15 (more )
Structure Level Pattern Image Note
TS28: spinal cord gray matter Present Widespread 8B
TS28: dorsal root ganglion Present 8B Expression was in the majority of neurons.
Specimen S1A: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: vomeronasal organ Absent s1A
Specimen S1B: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: vomeronasal organ Present Uniform s1B
Specimen S1C: postnatal day 15 (more )
Structure Level Pattern Image Note
TS28: vomeronasal organ Absent s1C
Specimen S2A: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: entorhinal cortex Absent S2A
Specimen S3A: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: eye Absent S3A
Specimen Table 1 E16: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: main olfactory bulb mitral cell layer Strong
TS24: cortical plate Moderate
TS24: habenula Moderate
TS24: hippocampal formation Moderate
TS24: thalamus Moderate
TS24: cerebral cortex intermediate zone Weak
TS24: cerebral cortex ventricular layer Absent
TS24: entorhinal cortex Absent
TS24: main olfactory bulb prospective glomerular layer Absent
TS24: main olfactory bulb prospective granule cell layer Absent
TS24: olfactory epithelium Absent
TS24: vomeronasal organ Absent
TS24: eye Absent No expression detected in Neuroblastic layer or Inner granular layer.
Specimen Table 1 P0: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: hippocampus CA1 Strong
TS27: hippocampus CA3 Strong
TS27: main olfactory bulb mitral cell layer Strong
TS27: vomeronasal organ Strong
TS27: cortical plate Moderate
TS27: habenula Moderate
TS27: olfactory epithelium Moderate
TS27: thalamus Moderate
TS27: cerebellum Purkinje cell layer Weak
TS27: dentate gyrus Weak
TS27: dorsal root ganglion Weak
TS27: spinal cord Weak
TS27: cerebellum internal granule cell layer Absent
TS27: cerebellum molecular layer Absent
TS27: cerebral cortex ventricular zone Absent
TS27: main olfactory bulb glomerular layer Absent
TS27: main olfactory bulb granule cell layer Absent
Specimen Table 1 P15: postnatal day 15 (more )
Structure Level Pattern Image Note
TS28: hippocampus CA3 Strong
TS28: cerebellum Purkinje cell layer Moderate
TS28: cortical layer II Moderate
TS28: cortical layer III Moderate
TS28: dentate gyrus Moderate
TS28: habenula Moderate
TS28: hippocampus CA1 Moderate
TS28: main olfactory bulb mitral cell layer Moderate
TS28: cortical layer IV Weak
TS28: cortical layer V Weak
TS28: cortical layer VI Weak
TS28: dorsal root ganglion Weak
TS28: spinal cord Weak
TS28: thalamus Weak
TS28: cerebellum internal granule cell layer Absent
TS28: cerebellum molecular layer Absent
TS28: cortical layer I Absent
TS28: main olfactory bulb glomerular layer Absent
TS28: main olfactory bulb granule cell layer Absent
TS28: olfactory epithelium Absent
TS28: vomeronasal organ Absent
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory