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Gene Expression Data
Assay Details
Assay
Reference: J:41724 Malgaretti N, et al., Mmot1, a new helix-loop-helix transcription factor gene displaying a sharp expression boundary in the embryonic mouse brain. J Biol Chem. 1997 Jul 11;272(28):17632-9
Assay type: RNA in situ
MGI Accession ID: MGI:6715530
Gene symbol: Ebf2
Gene name: early B cell factor 2
Probe: Mmot1 probe1
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 5a: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: hindbrain Present Regionally restricted 5a Expression was detected in the whole rhombencephalon (rhombomeres 1-4).
TS17: central nervous system Present Regionally restricted 5a Expression was detected from the spinal cord caudally to the mesencephalon and pretectal anlage (prosomere 1) rostrally.
TS17: future spinal cord Present 5a
TS17: midbrain Present 5a
TS17: trigeminal ganglion Present 5a

Specimen 5b: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: trigeminal ganglion Present 5b
TS17: midbrain lateral wall Present Regionally restricted 5b Expression was detected in alar and basal plate cells.
TS17: midbrain floor plate Absent 5b
TS17: midbrain roof plate Absent 5b

Specimen not shown: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: dorsal root ganglion Present
TS17: 1st branchial arch maxillary component Present Regionally restricted Expression was detected in the dorsal maxillary epithelium.

Specimen 5c: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: metencephalon Present 5c
TS20: midbrain Present 5c
TS20: hindbrain Present Regionally restricted 5c Expression spans the cerebellar plate and pontine nuclei. Caudally, expression stops abruptly at the rhombomere 4-5 interrhombomeric boundary, to resume from rhombomere 7 all the way to the tail.
TS20: cerebellum primordium Present 5c
TS20: hindbrain alar plate Present 5c
TS20: spinal cord Present 5c

Specimen 5d: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: metencephalon Present 5d
TS20: midbrain Present 5d
TS20: nasal epithelium Present 5d
TS20: cerebellum primordium Present 5d
TS20: hindbrain Present Regionally restricted 5d Expression spans the cerebellar plate and pontine nuclei. Caudally, expression stops abruptly at the rhombomere 4-5 interrhombomeric boundary, to resume from rhombomere 7 all the way to the tail.
TS20: hindbrain alar plate Present 5d
TS20: spinal cord Present 5d
TS20: prosomere 1 Weak 5d

Specimen 5e: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: cerebellum primordium Present 5e
TS20: metencephalon Present 5e
TS20: midbrain Present 5e
TS20: trigeminal ganglion Present 5e
TS20: mammillary area Weak 5e
TS20: preoptic area Weak 5e
TS20: prosomere 1 Weak 5e
TS20: prosomere 2 Present Regionally restricted 5e Expression was detected between prosomere 1 and 2.
TS20: epithalamus Absent 5e

Specimen 5f: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: diencephalon Present Regionally restricted 5f Expression in the diencephalon extended from prosomere 1 to the retroflex or habenula-interpeducular tract.
TS20: dorsal root ganglion Present 5f
TS20: spinal cord Present 5f
TS20: mammillary area Weak 5f
TS20: preoptic area Weak 5f
TS20: prosomere 1 Weak 5f
TS20: prosomere 2 Present Regionally restricted 5f Expression was detected between prosomere 1 and 2.
TS20: epithalamus Absent 5f

Specimen 5h: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: metencephalon Present 5h
TS21: midbrain Present 5h
TS21: cerebellum ventricular layer Weak 5h
TS21: diencephalon Weak Regionally restricted 5h Very weak expression was detected in the alar plate of the rostral diencephalon and telencephalon.
TS21: telencephalon Weak Regionally restricted 5h Very weak expression was detected in the alar plate of the rostral diencephalon and telencephalon.
TS21: spinal cord Present Regionally restricted 5h The alar spinal cord showed expression.
TS21: olfactory epithelium Strong 5h

Specimen 5i: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: metencephalon Present 5i
TS21: midbrain Present 5i
TS21: cerebellum ventricular layer Weak 5i
TS21: spinal cord Present Regionally restricted 5i The alar spinal cord showed expression.

Specimen 5j: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: metencephalon Present 5j
TS21: midbrain Present 5j
TS21: cerebellum ventricular layer Weak 5j
TS21: diencephalon Weak Regionally restricted 5j Very weak expression was detected in the alar plate of the rostral diencephalon and telencephalon.
TS21: telencephalon Weak Regionally restricted 5j Very weak expression was detected in the alar plate of the rostral diencephalon and telencephalon.
TS21: spinal cord Present Regionally restricted 5j The alar spinal cord showed expression.
TS21: olfactory epithelium Strong 5j
TS21: respiratory system epithelium Absent 5j

Specimen 5l: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: diencephalon Weak Regionally restricted 5l Very weak expression was detected in the alar plate of the rostral diencephalon and telencephalon.
TS21: telencephalon Weak Regionally restricted 5l Very weak expression was detected in the alar plate of the rostral diencephalon and telencephalon.
TS21: spinal cord Present Regionally restricted 5l The alar spinal cord showed expression.

Specimen 5m: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: diencephalon Weak Regionally restricted 5m Very weak expression was detected in the alar plate of the rostral diencephalon.
TS21: spinal cord Present Regionally restricted 5m The alar spinal cord showed expression.

Specimen 5o: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: metencephalon Present 5o
TS22: midbrain Present 5o
TS22: cerebellum ventricular layer Weak 5o
TS22: diencephalon Weak Regionally restricted 5o Very weak expression was detected in the alar plate of the rostral diencephalon and telencephalon.
TS22: telencephalon Weak Regionally restricted 5o Very weak expression was detected in the alar plate of the rostral diencephalon and telencephalon.
TS22: spinal cord Absent 5o

Specimen 5p: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: metencephalon Present 5p
TS22: midbrain Present 5p
TS22: cerebellum ventricular layer Weak 5p
TS22: diencephalon Weak Regionally restricted 5p Very weak expression was detected in the alar plate of the rostral diencephalon and telencephalon.
TS22: telencephalon Weak Regionally restricted 5p Very weak expression was detected in the alar plate of the rostral diencephalon and telencephalon.
TS22: spinal cord Absent 5p

Specimen 5q: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: diencephalon Weak Regionally restricted 5q Very weak expression was detected in the alar plate of the rostral diencephalon and telencephalon.
TS22: telencephalon Weak Regionally restricted 5q Very weak expression was detected in the alar plate of the rostral diencephalon and telencephalon.
TS22: olfactory epithelium Strong 5q
TS22: respiratory system epithelium Absent 5q


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory