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Gene Expression Data
Assay Details
Assay
Reference: J:297761 Reibring CG, et al., Distinct and Overlapping Expression Patterns of the Homer Family of Scaffolding Proteins and Their Encoding Genes in Developing Murine Cephalic Tissues. Int J Mol Sci. 2020 Feb 13;21(4):1264
Assay type: RNA in situ
MGI Accession ID: MGI:6682019
Gene symbol: Homer3
Gene name: homer scaffolding protein 3
Probe: Mm-Homer3 (584961)
Probe preparation: Antisense
Visualized with: Chromogenic
Assay notes: RNAscope assay.
Results
Specimen S1C: postnatal day 12 (more )
Structure Level Pattern Image Note
TS28: hippocampus CA3 Strong S1C Transcripts are in neuronal somata.
TS28: dentate gyrus Present S1C Transcripts are in neuronal somata.
TS28: hippocampus CA1 Present S1C Transcripts are in neuronal somata.
TS28: hippocampus CA2 Present S1C Transcripts are in neuronal somata.
TS28: brain blood vessel Present S1C Expression is in the endothelium of blood vessels in the hippocampal region and in meninges.

Specimen 1F: embryonic day 13.5 (more )
Note: Bud stage of tooth development.
Structure Level Pattern Image Note
TS21: molar epithelium Present 1F
TS21: molar mesenchyme Present 1F

Specimen 1L: embryonic day 14.5 (more )
Note: Cap stage of tooth development.
Structure Level Pattern Image Note
TS22: molar epithelium Present 1L
TS22: molar mesenchyme Present 1L

Specimen 2C: postnatal day 1 (more )
Note: Bell stage of tooth development.
Structure Level Pattern Image Note
TS27: molar dental papilla Present Regionally restricted 2C , 2C' Expression is in odontoblasts.
TS27: molar enamel organ Present Regionally restricted 2C , 2C' Expression is in differentiating ameloblasts.
TS27: blood vessel endothelium Strong 2C , 2C'

Specimen 3C: postnatal day 12 (more )
Structure Level Pattern Image Note
TS28: molar enamel organ Present Regionally restricted 3C Expression is in secretory ameloblasts, maturation-stage ameloblasts and cells of the papillary layer.
TS28: molar dental papilla Present Regionally restricted 3C Expression is in odontoblasts, both young and old.
TS28: blood vessel endothelium Strong Regionally restricted 3C Expression is in the endothelium of blood vessels penetrating the papillary layer, the dental sac mesenchyme and the dental pulp.

Specimen 3I: postnatal day 12 (more )
Structure Level Pattern Image Note
TS28: molar enamel organ Present Regionally restricted 3I Expression is in secretory ameloblasts, maturation-stage ameloblasts and cells of the papillary layer.
TS28: blood vessel endothelium Strong Regionally restricted 3I Expression is in the endothelium of blood vessels penetrating the papillary layer, the dental sac mesenchyme and the dental pulp.

Specimen 4C: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: corpus striatum Present 4C
TS22: hippocampus Present 4C
TS22: hypothalamus Present 4C
TS22: neocortex Present 4C
TS22: thalamus Present 4C
TS22: trigeminal ganglion Present 4C

Specimen 5C: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: retina Strong 5C' , 5C
TS22: lens epithelium Present 5C , 5C'
TS22: main olfactory bulb Present 5C , 5C'
TS22: masseter Present 5C , 5C'
TS22: skeletal muscle Present 5C , 5C'
TS22: submandibular gland primordium Present 5C , 5C'
TS22: tongue muscle Present 5C , 5C'
TS22: secondary palate Present Regionally restricted 5C' , 5C Expression is in the medial epithelial seam.
TS22: blood vessel endothelium Present 5C' , 5C
TS22: palatal rugae Present 5C' , 5C
TS22: olfactory epithelium Moderate 5C' , 5C

Specimen 6I: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: organ of Corti Present 6I Including inner and outer hair cells.
TS27: basilar membrane Present 6I
TS27: stria vascularis Present 6I
TS27: vestibular membrane Present 6I

Specimen 7C: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: tongue epithelium Present Regionally restricted 7C Expression is in lingual epithelium, absent in taste buds.
TS22: tongue mesenchyme Present Regionally restricted 7C Expression is in lingual mesenchyme.
TS22: blood vessel endothelium Present 7C

Specimen 7I: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: taste bud Weak 7I
TS27: tongue epithelium Weak Regionally restricted 7I Expression is in lingual epithelium.
TS27: blood vessel endothelium Present 7I


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory