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Gene Expression Data
Assay Details
Assay
Reference: J:297761 Reibring CG, et al., Distinct and Overlapping Expression Patterns of the Homer Family of Scaffolding Proteins and Their Encoding Genes in Developing Murine Cephalic Tissues. Int J Mol Sci. 2020 Feb 13;21(4):1264
Assay type: RNA in situ
MGI Accession ID: MGI:6682009
Gene symbol: Homer1
Gene name: homer scaffolding protein 1
Probe: Mm-Homer1 (557951)
Probe preparation: Antisense
Visualized with: Chromogenic
Assay notes: RNAscope assay.
Results
Specimen S1A: postnatal day 12 (more )
Structure Level Pattern Image Note
TS28: hippocampus CA1 Strong S1A Transcripts are in neuronal somata.
TS28: dentate gyrus Present S1A Transcripts are in neuronal somata.
TS28: hippocampus CA2 Present S1A Transcripts are in neuronal somata.
TS28: hippocampus CA3 Present S1A Transcripts are in neuronal somata.

Specimen 1D: embryonic day 13.5 (more )
Note: Bud stage of tooth development.
Structure Level Pattern Image Note
TS21: molar epithelium Present 1D
TS21: molar mesenchyme Present 1D

Specimen 1J: embryonic day 14.5 (more )
Note: Cap stage of tooth development.
Structure Level Pattern Image Note
TS22: molar epithelium Present 1J
TS22: molar mesenchyme Present 1J

Specimen 2A: postnatal day 1 (more )
Note: Bell stage of tooth development.
Structure Level Pattern Image Note
TS27: molar dental papilla Present Regionally restricted 2A' , 2A Expression is in odontoblasts.
TS27: molar enamel organ Present Regionally restricted 2A' , 2A Expression is in differentiating ameloblasts.
TS27: blood vessel endothelium Weak 2A , 2A'

Specimen 3A: postnatal day 12 (more )
Structure Level Pattern Image Note
TS28: molar enamel organ Present Regionally restricted 3A Expression is in secretory ameloblasts, maturation-stage ameloblasts and cells of the papillary layer.
TS28: molar dental papilla Present Regionally restricted 3A Expression is in odontoblasts, both young and old.
TS28: blood vessel endothelium Weak Regionally restricted 3A Expression is in the endothelium of blood vessels penetrating the papillary layer, the dental sac mesenchyme and the dental pulp.

Specimen 3G: postnatal day 12 (more )
Structure Level Pattern Image Note
TS28: molar enamel organ Present Regionally restricted 3G Expression is in secretory ameloblasts, maturation-stage ameloblasts and cells of the papillary layer.
TS28: blood vessel endothelium Weak Regionally restricted 3G Expression is in the endothelium of blood vessels penetrating the papillary layer, the dental sac mesenchyme and the dental pulp.

Specimen 4A: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: corpus striatum Present 4A
TS22: hippocampus Present 4A
TS22: hypothalamus Present 4A
TS22: neocortex Present 4A
TS22: thalamus Present 4A
TS22: trigeminal ganglion Present 4A

Specimen 5A: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: lens epithelium Present 5A , 5A'
TS22: main olfactory bulb Present 5A , 5A'
TS22: masseter Present 5A , 5A'
TS22: retina Present 5A , 5A'
TS22: skeletal muscle Present 5A , 5A'
TS22: tongue muscle Present 5A , 5A'
TS22: secondary palate Present Regionally restricted 5A , 5A' Expression is in the medial epithelial seam.
TS22: olfactory epithelium Moderate 5A , 5A'
TS22: palatal rugae Strong 5A , 5A'
TS22: submandibular gland primordium Present 5A

Specimen 6G: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: organ of Corti Present 6G Expression is enriched in inner and outer hair cells.
TS27: basilar membrane Present 6G
TS27: stria vascularis Present 6G
TS27: vestibular membrane Present 6G

Specimen 7A: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: tongue Present Regionally restricted 7A Expression is in taste buds.
TS22: tongue epithelium Present Regionally restricted 7A Expression is in lingual epithelium.
TS22: tongue muscle Present 7A
TS22: tongue mesenchyme Present 7A Expression is in lingual mesenchyme.

Specimen 7G: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: fungiform papillae Present Regionally restricted 7G Expression is in nerves innervating fungiform papillae.
TS27: taste bud Present 7G


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory