Gene Expression Data
Assay Details
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Assay
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Reference:
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J:175568
Flores-Alcantar A, et al., Dynamics of expression of ARID1A and ARID1B subunits in mouse embryos and in cells during the cell cycle. Cell Tissue Res. 2011 Jul;345(1):137-48
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:6515745
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Gene symbol:
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Arid1b
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Gene name:
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AT-rich interaction domain 1B
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Probe:
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Arid1b probe1
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Visualized with:
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Alkaline phosphatase
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Results
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Specimen
2a:
embryonic day 7.5
(more  )
Specimen
2a:
(close  )
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Genetic Background:
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CD-1
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Age:
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embryonic day 7.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Specimen
2b:
embryonic day 7.5
(more )
Specimen
2b:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 7.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS11: mesoderm |
Strong |
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2b
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Maximal intensity of expression in mesoderm.
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| TS11: embryo ectoderm |
Present |
Regionally restricted |
2b
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Expression in distal epiblast and visceral endoderm.
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| TS11: primitive endoderm |
Present |
Regionally restricted |
2b
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Expression in distal epiblast and visceral endoderm.
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Specimen
2c:
embryonic day 8.5
(more )
Specimen
2c:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 8.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS13: embryo |
Weak |
Regionally restricted |
2c
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Expression only detected after long exposure.
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| TS13: future spinal cord neural plate |
Present |
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2c
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Expression restricted to neural tissue, including neural crest and posterior neural plate.
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| TS13: neural crest |
Present |
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2c
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Expression restricted to neural tissue, including neural crest and posterior neural plate.
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| TS13: neural ectoderm |
Present |
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2c
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Expression restricted to neural tissue, including neural crest and posterior neural plate.
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Specimen
2d:
embryonic day 8.5
(more )
Specimen
2d:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 8.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Specimen
2e:
embryonic day 9.5
(more )
Specimen
2e:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Specimen
2f:
embryonic day 9.5
(more )
Specimen
2f:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: branchial arch |
Strong |
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2f
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Highest levels of expression in branchial arches, optic vesicle, head mesenchyme, trunk ventral mesenchyme, and intestine.
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| TS15: gut |
Strong |
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2f
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Highest levels of expression in branchial arches, optic vesicle, head mesenchyme, trunk ventral mesenchyme, and intestine.
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| TS15: head mesenchyme |
Strong |
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2f
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Highest levels of expression in branchial arches, optic vesicle, head mesenchyme, trunk ventral mesenchyme, and intestine.
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| TS15: optic vesicle |
Strong |
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2f
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Highest levels of expression in branchial arches, optic vesicle, head mesenchyme, trunk ventral mesenchyme, and intestine.
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| TS15: trunk mesenchyme |
Strong |
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2f
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Highest levels of expression in branchial arches, optic vesicle, head mesenchyme, trunk ventral mesenchyme, and intestine.
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Specimen
1g:
embryonic day 10.5
(more )
Specimen
1g:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS17: embryo |
Weak |
Regionally restricted |
2g
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Expression downregulated at 10.5 dpc.
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| TS17: eye |
Present |
Regionally restricted |
2g
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Expression mainly in optic vesicle and otic vesicle.
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| TS17: otocyst |
Present |
Regionally restricted |
2g
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Expression mainly in optic vesicle and otic vesicle.
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Analysis Tools