Gene Expression Data
Assay Details
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Assay
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Reference:
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J:37194
Thomas P, et al., Anterior primitive endoderm may be responsible for patterning the anterior neural plate in the mouse embryo. Curr Biol. 1996 Nov 1;6(11):1487-96
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:6509302
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Gene symbol:
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Hesx1
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Gene name:
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homeobox gene expressed in ES cells
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Probe:
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Hesx1 probe
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Results
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Specimen
1a:
embryonic day 6.5
(more  )
Specimen
1a:
(close  )
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Genetic Background:
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(C57BL/10 x CBA)F1
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Age:
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embryonic day 6.5
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Sex:
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Not Specified
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Type:
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whole mount
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| Structure |
Level |
Pattern |
Image |
Note |
| TS9: embryo endoderm |
Present |
Regionally restricted |
1a
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Expressed in a small patch of cells (10-20 cells) in the anterior midline. This region was separated from the extraembryonic-embryonic junction by approximately five endoderm cell diameters.
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Specimen
1b:
embryonic day 6.5
(more )
Note: early-streak stage
Specimen
1b:
(close )
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Genetic Background:
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(C57BL/10 x CBA)F1
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Age:
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embryonic day 6.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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early-streak stage
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| Structure |
Level |
Pattern |
Image |
Note |
| TS9: embryo endoderm |
Present |
Regionally restricted |
1b
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Expression remained restricted to a small patch of endoderm cells during primitive streak elongation.
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Specimen
1c:
embryonic day 7.0
(more )
Note: late-streak stage
Specimen
1c:
(close )
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Genetic Background:
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(C57BL/10 x CBA)F1
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Age:
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embryonic day 7.0
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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late-streak stage
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| Structure |
Level |
Pattern |
Image |
Note |
| TS10: neural ectoderm |
Weak |
Regionally restricted |
1c
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Expressed in the prospective neurectoderm immediately adjacent to the hybridizing endoderm domain.
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| TS10: embryo endoderm |
Present |
Regionally restricted |
1c
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Expressed in the anterior endoderm.
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Specimen
1d:
embryonic day 7.5
(more )
Note: headfold stage
Specimen
1d:
(close )
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Genetic Background:
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(C57BL/10 x CBA)F1
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Age:
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embryonic day 7.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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headfold stage
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| Structure |
Level |
Pattern |
Image |
Note |
| TS11: neural ectoderm |
Present |
Regionally restricted |
1d
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Expression in the anterior neurectoderm intensified and spread laterally during formation of the cranial neural folds to encompass the developing prosencephalon.
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Specimen
1e:
embryonic day 7.5
(more )
Note: neural plate stage
Specimen
1e:
(close )
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Genetic Background:
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(C57BL/10 x CBA)F1
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Age:
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embryonic day 7.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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neural plate stage
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| Structure |
Level |
Pattern |
Image |
Note |
| TS11: neural ectoderm |
Present |
Regionally restricted |
1e
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Expression in the anterior neurectoderm intensified and spread laterally during formation of the cranial neural folds to encompass the developing prosencephalon.
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Specimen
1f:
embryonic day 7.5
(more )
Note: headfold stage
Specimen
1f:
(close )
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Genetic Background:
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(C57BL/10 x CBA)F1
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Age:
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embryonic day 7.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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headfold stage
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| Structure |
Level |
Pattern |
Image |
Note |
| TS11: neural ectoderm |
Present |
Regionally restricted |
1f
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Expression in the anterior neurectoderm intensified and spread laterally during formation of the cranial neural folds to encompass the developing prosencephalon.
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Specimen
1g:
embryonic day 6.5
(more )
Note: early-streak stage
Specimen
1g:
(close )
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Genetic Background:
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(C57BL/10 x CBA)F1
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Age:
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embryonic day 6.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Note:
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early-streak stage
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| Structure |
Level |
Pattern |
Image |
Note |
| TS9: embryo endoderm |
Present |
Regionally restricted |
1g
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Expression remained restricted to a small patch of endoderm cells during primitive streak elongation.
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Specimen
1i:
embryonic day 6.5
(more )
Note: Early-streak stage. Also stained for T (assay MGI:6509305).
Specimen
1i:
(close )
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Genetic Background:
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(C57BL/10 x CBA)F1
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Age:
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embryonic day 6.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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Early-streak stage. Also stained for T (assay MGI:6509305).
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| Structure |
Level |
Pattern |
Image |
Note |
| TS9: embryo endoderm |
Present |
Regionally restricted |
1i
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Expression remained restricted to a small patch of endoderm cells.
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Specimen
1j:
embryonic day 7.0
(more )
Note: Midstreak stage. Also stained for T (assay MGI:6509305).
Specimen
1j:
(close )
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Genetic Background:
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(C57BL/10 x CBA)F1
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Age:
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embryonic day 7.0
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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Midstreak stage. Also stained for T (assay MGI:6509305).
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| Structure |
Level |
Pattern |
Image |
Note |
| TS10: embryo endoderm |
Present |
Regionally restricted |
1j
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Expression remained restricted to a small patch of endoderm cells.
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Specimen
1k:
embryonic day 8.0
(more )
Note: early somite-stage
Specimen
1k:
(close )
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Genetic Background:
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(C57BL/10 x CBA)F1
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Age:
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embryonic day 8.0
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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early somite-stage
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| Structure |
Level |
Pattern |
Image |
Note |
| TS12: neural ectoderm |
Present |
Regionally restricted |
1k
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Expression in the anterior neurectoderm intensified and spread laterally during formation of the cranial neural folds to encompass the developing prosencephalon.
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| TS12: future prosencephalon |
Present |
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1k
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Specimen
1l:
embryonic day 8.0
(more )
Note: early somite-stage
Specimen
1l:
(close )
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Genetic Background:
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(C57BL/10 x CBA)F1
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Age:
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embryonic day 8.0
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Note:
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early somite-stage
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Specimen
1m:
embryonic day 9.5
(more )
Specimen
1m:
(close )
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Genetic Background:
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(C57BL/10 x CBA)F1
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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whole mount
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Specimen
1n:
embryonic day 11.5
(more )
Specimen
1n:
(close )
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Genetic Background:
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(C57BL/10 x CBA)F1
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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whole mount
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Specimen
1o:
embryonic day 11.5
(more )
Specimen
1o:
(close )
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Genetic Background:
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(C57BL/10 x CBA)F1
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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whole mount
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Analysis Tools