About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:292915 Yong HJ, et al., The unique expression profile of FAM19A1 in the mouse brain and its association with hyperactivity, long-term memory and fear acquisition. Sci Rep. 2020 Mar 2;10(1):3969
Assay type: In situ reporter (knock in)
MGI Accession ID: MGI:6470874
Gene symbol: Tafa1
Gene name: TAFA chemokine like family member 1
Reporter: lacZ
Direct Detection
Assay notes: Fix: 4% paraformaldehyde; 0.2% glutaraldehyde.
Results
Specimen 2A E14.5 (1): embryonic day 14.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS22: brain Ambiguous 2A E14.5 (1)

Specimen 2A E14.5 (2): embryonic day 14.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS22: piriform cortex Present 2A E14.5 (2)

Specimen 2A E14.5 (3): embryonic day 14.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS22: piriform cortex Present 2A E14.5 (3)

Specimen 2A E14.5 (4): embryonic day 14.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS22: piriform cortex Present 2A E14.5 (4)

Specimen 2A E14.5 (5): embryonic day 14.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS22: neocortex Present Regionally restricted 2A E14.5 (5) Expression was detected in the entorhinal cortex.

Specimen 2A E18.5 (1): embryonic day 18.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS26: piriform cortex Present 2A E18.5 (1)

Specimen 2A E18.5 (2): embryonic day 18.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS26: piriform cortex Present 2A E18.5 (2)

Specimen 2A E18.5 (3): embryonic day 18.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS26: piriform cortex Present 2A E18.5 (3)

Specimen 2A E18.5 (4): embryonic day 18.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS26: entorhinal cortex Present 2A E18.5 (4)

Specimen 2A E18.5 (5): embryonic day 18.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS26: entorhinal cortex Present 2A E18.5 (5)

Specimen 2B P0.5 (1): postnatal day 0.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS27: brain Ambiguous 2B P0.5 (1)

Specimen 2B P0.5 (2): postnatal day 0.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS27: piriform cortex Present 2B P0.5 (2)

Specimen 2B P0.5 (3): postnatal day 0.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS27: piriform cortex Present 2B P0.5 (3)

Specimen 2B P0.5 (4): postnatal day 0.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS27: entorhinal cortex Present 2B P0.5 (4)

Specimen 2B P0.5 (5): postnatal day 0.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS27: entorhinal cortex Present 2B P0.5 (5)
TS27: posteromedial cortical amygdaloid nucleus Present 2B P0.5 (5)

Specimen 2B P7.5 (1): postnatal day 7.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: neocortex region Present Regionally restricted 2B P7.5 (1) Expression was detected in the prelimbic cortex.

Specimen 2B P7.5 (2): postnatal day 7.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: piriform cortex Present 2B P7.5 (2)

Specimen 2B P7.5 (3): postnatal day 7.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: piriform cortex Present 2B P7.5 (3)

Specimen 2B P7.5 (4): postnatal day 7.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: entorhinal cortex Present 2B P7.5 (4)
TS28: posteromedial cortical amygdaloid nucleus Present 2B P7.5 (4)

Specimen 2B P7.5 (5): postnatal day 7.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: entorhinal cortex Present 2B P7.5 (5)
TS28: posteromedial cortical amygdaloid nucleus Present 2B P7.5 (5)

Specimen 2B P14.5 (1): postnatal day 14.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: neocortex region Present Regionally restricted 2B P14.5 (1) Expression was detected in the prelimbic cortex.

Specimen 2B P14.5 (2): postnatal day 14.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: piriform cortex Present 2B P14.5 (2)

Specimen 2B P14.5 (3): postnatal day 14.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: amygdala Present 2B P14.5 (3)
TS28: hippocampus Present 2B P14.5 (3)

Specimen 2B P14.5 (4): postnatal day 14.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: entorhinal cortex Present 2B P14.5 (4)
TS28: hippocampus Present 2B P14.5 (4)
TS28: posteromedial cortical amygdaloid nucleus Present 2B P14.5 (4)

Specimen 2B P14.5 (5): postnatal day 14.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: entorhinal cortex Present 2B P14.5 (5)

Specimen 3A +/-: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Note: Double labeled: red - Tafa1; green - Cux1 (assay MGI:6470920).
Structure Level Pattern Image Note
TS28: cortical layer II Present 3A FAM19A1 LacZ KI (+/-) X-gal , 3A FAM19A1 LacZ KI (+/-) Cux1 X-gal X-gal precipitate colocalized with expression of Cux1 in cortical layers II-III.
TS28: cortical layer III Present 3A FAM19A1 LacZ KI (+/-) X-gal , 3A FAM19A1 LacZ KI (+/-) Cux1 X-gal X-gal precipitate colocalized with expression of Cux1 in cortical layers II-III.

Specimen 3A -/-: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1tm1(KOMP)Vlcg (more )
Note: Double labeled: red - Tafa1; green - Cux1 (assay MGI:6470920).
Structure Level Pattern Image Note
TS28: cortical layer II Present 3A FAM19A1 LacZ KI (-/-) Cux1 X-gal , 3A FAM19A1 LacZ KI (-/-) X-gal X-gal precipitate colocalized with expression of Cux1 in cortical layers II-III.
TS28: cortical layer III Present 3A FAM19A1 LacZ KI (-/-) Cux1 X-gal , 3A FAM19A1 LacZ KI (-/-) X-gal X-gal precipitate colocalized with expression of Cux1 in cortical layers II-III.

Specimen 3C: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: neocortex Present 3C

Specimen 3D: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: anterior olfactory nucleus Present 3D

Specimen 3E: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: lateral septal nucleus Present 3E
TS28: piriform cortex Present 3E

Specimen 3F: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: cortical layer II Present 3F
TS28: cortical layer III Present 3F
TS28: cortical layer V Present 3F
TS28: hippocampus CA1 Present 3F
TS28: hippocampus CA2 Present 3F
TS28: hippocampus CA3 Present 3F
TS28: dentate gyrus Absent 3F

Specimen 3G: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: basolateral amygdaloid nucleus Present 3G
TS28: basomedial amygdaloid nucleus Present 3G
TS28: lateral amygdaloid nucleus Present 3G

Specimen 3H: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: amygdalopiriform transition area Present 3H
TS28: piriform cortex Present 3H
TS28: posteromedial cortical amygdaloid nucleus Present 3H

Specimen 3I: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: superior colliculus Present Regionally restricted 3I Expression was detected in the optic layer of the superior colliculus.

Specimen 3J: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: entorhinal cortex Present 3J

Specimen 3K: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: medial geniculate nucleus Present 3K

Specimen not shown: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: lateral geniculate nucleus Absent
TS28: optic chiasma Absent

Specimen S4A -/-: embryonic day 12.5; Tafa1tm1(KOMP)Vlcg/Tafa1tm1(KOMP)Vlcg (more )
Structure Level Pattern Image Note
TS20: embryo Absent S4A FAM19A1 LacZ KI (-/-)

Specimen S4B +/- Superior E14.5: embryonic day 14.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS22: piriform cortex Present S4B Superior E14.5
TS22: neocortex Present Regionally restricted S4B Superior E14.5 Expression was detected in the entorhinal cortex.

Specimen S4B +/- Inferior E14.5: embryonic day 14.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS22: piriform cortex Present S4B Inferior E14.5
TS22: neocortex Present Regionally restricted S4B Inferior E14.5 Expression was detected in the entorhinal cortex.

Specimen S4B +/- Superior E16.5: embryonic day 16.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS24: entorhinal cortex Present S4B Superior E16.5
TS24: piriform cortex Present S4B Superior E16.5

Specimen S4B +/- Inferior E16.5: embryonic day 16.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS24: entorhinal cortex Present S4B Inferior E16.5
TS24: piriform cortex Present S4B Inferior E16.5

Specimen S4B +/- Superior E18.5: embryonic day 18.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS26: entorhinal cortex Present S4B Superior E18.5
TS26: piriform cortex Present S4B Superior E18.5

Specimen S4B +/- Inferior E18.5: embryonic day 18.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS26: entorhinal cortex Present S4B Inferior E18.5
TS26: piriform cortex Present S4B Inferior E18.5

Specimen S4C +/- Superior P0.5: postnatal day 0.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS27: neocortex Present S4C Superior P0.5

Specimen S4C +/- Inferior P0.5: postnatal day 0.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS27: neocortex Present S4C Inferior P0.5

Specimen S4C +/- Superior P2.5: postnatal day 2.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS27: neocortex Present S4C Superior P2.5
TS27: brain Present S4C Superior P2.5 Neocortical expression of beta-galactosidase was gradually expanded to other regions as postnatal age increased.

Specimen S4C +/- Inferior P2.5: postnatal day 2.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS27: neocortex Present S4C Inferior P2.5
TS27: brain Present S4C Inferior P2.5 Neocortical expression of beta-galactosidase was gradually expanded to other regions as postnatal age increased.

Specimen S4C +/- Superior P7.5: postnatal day 7.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: neocortex Present S4C Superior P7.5
TS28: brain Present S4C Superior P7.5 Neocortical expression of beta-galactosidase was gradually expanded to other regions as postnatal age increased.

Specimen S4C +/- Inferior P7.5: postnatal day 7.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: neocortex Present S4C Inferior P7.5
TS28: brain Present S4C Inferior P7.5 Neocortical expression of beta-galactosidase was gradually expanded to other regions as postnatal age increased.

Specimen S4C +/- Superior P14.5: postnatal day 14.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: neocortex Present S4C Superior P14.5
TS28: brain Present S4C Superior P14.5 Neocortical expression of beta-galactosidase was gradually expanded to other regions as postnatal age increased.

Specimen S4C +/- Inferior P14.5: postnatal day 14.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: neocortex Present S4C Inferior P14.5
TS28: brain Present S4C Inferior P14.5 Neocortical expression of beta-galactosidase was gradually expanded to other regions as postnatal age increased.

Specimen S4C +/- Superior P56.5: postnatal day 56.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Present S4C Superior P56.5 Expression was detected in all cortical areas in the adult.
TS28: visual cortex Present S4C Superior P56.5

Specimen S4C +/- Inferior P56.5: postnatal day 56.5; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Present S4C Inferior P56.5 Expression was detected in all cortical areas in the adult.

Specimen S5A: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb Trace S5A Expression was hardly observed in the olfactory bulb.

Specimen S5B: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: lateral preoptic area Present S5B
TS28: medial preoptic nucleus Present S5B

Specimen S5C: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: ventromedial hypothalamic nucleus Present S5C

Specimen S5D: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: brain Present S5D

Specimen S5E: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: brain Present S5E

Specimen S5F: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: auditory cortex Present S5F
TS28: dorsal cochlear nucleus Present S5F

Specimen S5G: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: brain Present S5G

Specimen S5H: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1tm1(KOMP)Vlcg (more )
Structure Level Pattern Image Note
TS28: cerebral internal capsule Present S5H
TS28: cerebral peduncle Present S5H

Specimen S5I: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1tm1(KOMP)Vlcg (more )
Structure Level Pattern Image Note
TS28: ventral corticospinal tract Present S5I Expression was detected in the pyramidal tract.

Specimen S5J: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: spinal cord cervical region Present S5J

Specimen S5K: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: spinal cord thoracic region Present S5K

Specimen S5L: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: spinal cord lumbar region Present S5L

Specimen S5M: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: spinal cord sacral region Present S5M

Specimen S5N: postnatal adult; Tafa1tm1(KOMP)Vlcg/Tafa1+ (more )
Structure Level Pattern Image Note
TS28: dorsal root ganglion Present S5N


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
04/23/2024
MGI 6.23
The Jackson Laboratory