Gene Expression Data
Assay Details
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Assay
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Reference:
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J:162061
Slaten ER, et al., Transient expression of serotonin 5-HT4 receptors in the mouse developing thalamocortical projections. Dev Neurobiol. 2010 Feb 15;70(3):165-81
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Assay type:
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Immunohistochemistry
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MGI Accession ID:
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MGI:6460412
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Gene symbol:
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Htr4
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Gene name:
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5 hydroxytryptamine (serotonin) receptor 4
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Results
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Specimen
1A:
embryonic day 17.5
(more  )
Specimen
1A:
(close  )
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Genetic Background:
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CD-1
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Age:
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embryonic day 17.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Specimen
3A:
embryonic day 13.5
(more )
Specimen
3A:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 13.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS21: diencephalon |
Present |
Regionally restricted |
3A
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Expression in fibers in lateral diencephalon which appear to abruptly change direction between caudal and rostral diencephalon, and advance in the caudal-rostral direction in the rostral diencephalon.
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Specimen
3C:
embryonic day 13.5
(more )
Specimen
3C:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 13.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS21: diencephalon |
Present |
Regionally restricted |
3C
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Expression in lateral diencephalon.
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| TS21: corpus striatum |
Present |
Regionally restricted |
3C
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Expression in a stream of fibers in the striatum.
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Specimen
3D:
embryonic day 13.5
(more )
Specimen
3D:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 13.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS21: diencephalon |
Present |
Regionally restricted |
3D
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Expression in fibers in lateral diencephalon.
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Specimen
4B:
embryonic day 15.5
(more )
Specimen
4B:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 15.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS23: diencephalon |
Strong |
Regionally restricted |
4B
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Strong expression in fibers originating in diencephalon.
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| TS23: corpus striatum |
Strong |
Regionally restricted |
4B
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Strong expression in fibers entering striatum.
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| TS23: brainstem |
Strong |
Regionally restricted |
4B
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Strong expression in lower brainstem.
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Specimen
4C:
embryonic day 15.5
(more )
Specimen
4C:
(close )
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Genetic Background:
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CD-1
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Age:
|
embryonic day 15.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Cryosection
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS23: diencephalon |
Strong |
Regionally restricted |
4C
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Strong expression in fibers originating in diencephalon.
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| TS23: corpus striatum |
Strong |
Regionally restricted |
4C
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Strong expression in fibers entering striatum.
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Specimen
4D:
embryonic day 15.5
(more )
Specimen
4D:
(close )
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Genetic Background:
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CD-1
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Age:
|
embryonic day 15.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
|
Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS23: corpus striatum |
Present |
Regionally restricted |
4D
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Expression in fascicles formed by fibers in striatum.
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Specimen
4E:
embryonic day 15.5
(more )
Specimen
4E:
(close )
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Genetic Background:
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CD-1
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Age:
|
embryonic day 15.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Specimen
4F:
embryonic day 15.5
(more )
Specimen
4F:
(close )
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Genetic Background:
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CD-1
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Age:
|
embryonic day 15.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
|
Cryosection
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS23: diencephalon |
Strong |
Regionally restricted |
4F
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Strong expression in fibers originating in diencephalon.
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Specimen
5A:
embryonic day 15.5
(more )
Specimen
5A:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 15.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS23: neocortex |
Present |
Regionally restricted |
5A
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Expression in fibers turning rostrally to reach the frontal cortex and providing dense input to the developing anterior cingulate cortex.
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Specimen
5B:
embryonic day 15.5
(more )
Specimen
5B:
(close )
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Genetic Background:
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CD-1
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Age:
|
embryonic day 15.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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|
Embedding:
|
Cryosection
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS23: corpus striatum |
Strong |
Regionally restricted |
5B
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Strong expression in fibers in the striatum.
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Specimen
5C:
embryonic day 15.5
(more )
Specimen
5C:
(close )
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Genetic Background:
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CD-1
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Age:
|
embryonic day 15.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS23: forebrain |
Strong |
Regionally restricted |
5C
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Strong expression in fibers at telencephalon-diencephalon junction.
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Specimen
5D:
embryonic day 15.5
(more )
Specimen
5D:
(close )
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Genetic Background:
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CD-1
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Age:
|
embryonic day 15.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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|
Embedding:
|
Cryosection
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS23: neocortex |
Present |
Regionally restricted |
5D
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Expression in fibers turning rostrally to reach the frontal cortex and providing dense input to the developing anterior cingulate cortex.
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Specimen
5E:
embryonic day 15.5
(more )
Specimen
5E:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 15.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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|
Embedding:
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Cryosection
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS23: corpus striatum |
Strong |
Regionally restricted |
5E
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Strong expression in fibers in the striatum.
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Specimen
5F:
embryonic day 15.5
(more )
Specimen
5F:
(close )
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Genetic Background:
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CD-1
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Age:
|
embryonic day 15.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
|
Cryosection
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS23: forebrain |
Strong |
Regionally restricted |
5F
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Strong expression in fibers at telencephalon-diencephalon junction.
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Specimen
7B:
embryonic day 17.5
(more )
Specimen
7B:
(close )
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Genetic Background:
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CD-1
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Age:
|
embryonic day 17.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
|
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS25: forebrain |
Weak |
Regionally restricted |
7B
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Low expression in thalamocortical projections in diencephalon-telencephalon junction and striatum.
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| TS25: diencephalon internal capsule |
Absent |
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7B
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No expression in thalamocortical fibers entering internal capsule.
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Specimen
7D:
embryonic day 17.5
(more )
Specimen
7D:
(close )
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Genetic Background:
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CD-1
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Age:
|
embryonic day 17.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
|
section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
|
Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS25: forebrain |
Weak |
Regionally restricted |
7D
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Low expression in thalamocortical projections in diencephalon-telencephalon jusnction and striatum.
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| TS25: cerebral cortex intermediate zone |
Strong |
Regionally restricted |
7D
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Strong expression in putative thalamocortical fibers in cortical intermediate zone.
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Specimen
8A:
embryonic day 17.5
(more )
Specimen
8A:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 17.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Specimen
8B:
embryonic day 17.5
(more )
Specimen
8B:
(close )
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Genetic Background:
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CD-1
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Age:
|
embryonic day 17.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Specimen
8C:
embryonic day 17.5
(more )
Specimen
8C:
(close )
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Genetic Background:
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CD-1
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Age:
|
embryonic day 17.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
|
Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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|
Embedding:
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Cryosection
|
Specimen
8D:
embryonic day 17.5
(more )
Specimen
8D:
(close )
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Genetic Background:
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CD-1
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Age:
|
embryonic day 17.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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|
Embedding:
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Cryosection
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Specimen
8F:
embryonic day 17.5
(more )
Specimen
8F:
(close )
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Genetic Background:
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CD-1
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Age:
|
embryonic day 17.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Specimen
P3 not shown:
postnatal day 3
(more )
Specimen
P3 not shown:
(close )
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Genetic Background:
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CD-1
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Age:
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postnatal day 3
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS27: brain |
Present |
Regionally restricted |
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No expression in thalamocortical fibers postnatally.
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Specimen
10B:
postnatal day 14
(more )
Specimen
10B:
(close )
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Genetic Background:
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CD-1
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Age:
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postnatal day 14
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
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Cryosection
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Specimen
10C:
postnatal day 14
(more )
Specimen
10C:
(close )
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Genetic Background:
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CD-1
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Age:
|
postnatal day 14
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
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Cryosection
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Specimen
10D:
postnatal day 14
(more )
Specimen
10D:
(close )
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Genetic Background:
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CD-1
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Age:
|
postnatal day 14
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
|
Cryosection
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Analysis Tools