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Gene Expression Data
Assay Details
Assay
Reference: J:99792 Mari F, et al., CDKL5 belongs to the same molecular pathway of MeCP2 and it is responsible for the early-onset seizure variant of Rett syndrome. Hum Mol Genet. 2005 Jul 15;14(14):1935-46
Assay type: RNA in situ
MGI Accession ID: MGI:6455001
Gene symbol: Cdkl5
Gene name: cyclin dependent kinase like 5
Probe: Cdkl5 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 3B: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: cortical plate Weak 3B
Specimen 3D: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: hippocampus Strong 3D
Specimen 3D inset: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: dentate gyrus Present 3D inset
Specimen 3F: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: amygdala Strong 3F
TS28: cortical layer I Strong 3F
TS28: cortical layer II Strong 3F
TS28: cortical layer III Strong 3F
TS28: cortical layer IV Strong 3F
TS28: cortical layer V Strong 3F
TS28: cortical layer VI Strong 3F
TS28: dorsal lateral geniculate nucleus Strong 3F
TS28: hippocampus Strong 3F
TS28: piriform cortex Strong 3F
Specimen 3H: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: cortical layer I Strong 3H
TS28: cortical layer II Strong 3H
TS28: cortical layer III Strong 3H
TS28: cortical layer IV Strong 3H
TS28: cortical layer V Strong 3H
TS28: cortical layer VI Strong 3H
Specimen 3J: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: cerebellum external granule cell layer Strong 3J
TS28: cerebellum internal granule cell layer Strong 3J
TS28: cerebellum Purkinje cell layer Weak 3J
Specimen 3L: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: cerebellum external granule cell layer Strong 3L
TS28: cerebellum internal granule cell layer Strong 3L
TS28: cerebellum Purkinje cell layer Weak 3L
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory