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Gene Expression Data
Assay Details
Assay
Reference: J:184159 Antypa M, et al., Differential gene expression in migratory streams of cortical interneurons. Eur J Neurosci. 2011 Nov;34(10):1584-94
Assay type: RNA in situ
MGI Accession ID: MGI:6451035
Gene symbol: Lhx6
Gene name: LIM homeobox protein 6
Probe: Lhx6 probe11
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 3K: embryonic day 13.5; Gad1tm1.1Tama/Gad1+ (more )
Structure Level Pattern Image Note
TS21: forebrain Present Regionally restricted 3K
Specimen 3K': embryonic day 13.5; Gad1tm1.1Tama/Gad1+ (more )
Structure Level Pattern Image Note
TS21: cerebral cortex intermediate zone Present 3K'
TS21: cortical preplate Present 3K'
Specimen 3L: embryonic day 15.5; Gad1tm1.1Tama/Gad1+ (more )
Structure Level Pattern Image Note
TS23: forebrain Present Regionally restricted 3L
Specimen 3L': embryonic day 15.5; Gad1tm1.1Tama/Gad1+ (more )
Structure Level Pattern Image Note
TS23: cerebral cortex intermediate zone Present 3L' Expressed more widely, but predominantly in marginal zone and intermediate zone/subventricular zone.
TS23: cerebral cortex marginal layer Present 3L' Expressed more widely, but predominantly in marginal zone and intermediate zone/subventricular zone.
TS23: cerebral cortex subventricular zone Present 3L' Expressed more widely, but predominantly in marginal zone and intermediate zone/subventricular zone.
Specimen 4E: embryonic day 13.5; Gad1tm1.1Tama/Gad1+ (more )
Structure Level Pattern Image Note
TS21: forebrain Present Regionally restricted 4E
Specimen 4E': embryonic day 13.5; Gad1tm1.1Tama/Gad1+ (more )
Structure Level Pattern Image Note
TS21: cerebral cortex intermediate zone Present 4E'
TS21: cortical preplate Present 4E'
Specimen 4F: embryonic day 15.5; Gad1tm1.1Tama/Gad1+ (more )
Structure Level Pattern Image Note
TS23: cerebral cortex intermediate zone Present 4F
TS23: cerebral cortex marginal layer Present 4F
TS23: cerebral cortex subventricular zone Present 4F
Specimen 4F': embryonic day 15.5; Gad1tm1.1Tama/Gad1+ (more )
Structure Level Pattern Image Note
TS23: cerebral cortex intermediate zone Present 4F' Expressed more widely, but predominantly in marginal zone and intermediate zone/subventricular zone.
TS23: cerebral cortex marginal layer Present 4F' Expressed more widely, but predominantly in marginal zone and intermediate zone/subventricular zone.
TS23: cerebral cortex subventricular zone Present 4F' Expressed more widely, but predominantly in marginal zone and intermediate zone/subventricular zone.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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01/06/2026
MGI 6.24 		The Jackson Laboratory