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Gene Expression Data
Assay Details
Assay
Reference: J:248983 Varadarajan SG, et al., Netrin1 establishes multiple boundaries for axon growth in the developing spinal cord. Dev Biol. 2017 Oct 1;430(1):177-187
Assay type: RNA in situ
MGI Accession ID: MGI:6446836
Gene symbol: Ntn1
Gene name: netrin 1
Probe: pMNET3UTRA-
Probe preparation: labelled with digoxigenin
Visualized with: Alkaline phosphatase
Results
Specimen 2A: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: future spinal cord Present Regionally restricted 2A Expression in two distinct regions of spinal cord. Expression excluded from dorsal-most spinal cord.
TS17: neural tube floor plate Weak 2A
TS17: neural tube lateral wall Strong 2A Lower level of expression by neural progenitor cells in ventricular zone.

Specimen 2B: embryonic day 10.5; Ntn1Gt(ST629)Byg/Ntn1Gt(ST629)Byg (more )
Structure Level Pattern Image Note
TS17: neural tube floor plate Trace 2B

Specimen 2G: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: neural tube lateral wall Present Graded 2G Graded expression in domain extending from floor plate into dorsal spinal cord.

Specimen 2H: embryonic day 11.5; Ntn1Gt(ST629)Byg/Ntn1Gt(ST629)Byg (more )
Structure Level Pattern Image Note
TS19: neural tube floor plate Trace 2H
TS19: neural tube ventricular layer Absent 2H

Specimen 2K: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: spinal cord ventricular layer Present Graded 2K Bilaterally symmetric domains of graded expression in ventricular zone. Commissural axons have resolved into medial and lateral fascicles.
TS20: spinal cord lateral wall Present Regionally restricted 2K Additional domain of expression in lateral region, immediately adjacent to dorsal root entry zone (DREZ).

Specimen 2L: embryonic day 12.5; Ntn1Gt(ST629)Byg/Ntn1Gt(ST629)Byg (more )
Structure Level Pattern Image Note
TS20: spinal cord Ambiguous 2L
TS20: spinal cord ventricular layer Absent 2L


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/28/2024
MGI 6.13
The Jackson Laboratory