Gene Expression Data
Assay Details
|
Assay
|
|
Reference:
|
J:35238
Ben-Arie N, et al., Evolutionary conservation of sequence and expression of the bHLH protein Atonal suggests a conserved role in neurogenesis. Hum Mol Genet. 1996 Sep;5(9):1207-16
|
|
Assay type:
|
RNA in situ
|
|
MGI Accession ID:
|
MGI:6437825
|
|
Gene symbol:
|
Atoh1
|
|
Gene name:
|
atonal bHLH transcription factor 1
|
|
Probe:
|
Math1 cDNA10
|
|
Probe preparation:
|
Antisense labelled with S35 RNA
|
|
|
Results
|
Specimen
4A1:
embryonic day 9.0
(more  )
Specimen
4A1:
(close  )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 9.0
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS14: future spinal cord |
Present |
Regionally restricted |
4A1
|
Expression was detected in neuroblasts lateral to the roof plate.
|
Specimen
4A2:
embryonic day 12.0
(more )
Note: Specimens 4A2 through 4A10 - Embryo sectioned perpendicular to the anteroposterior axis. Panel 2 shows the anterior-most section.
Specimen
4A2:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 12.0
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Note:
|
Specimens 4A2 through 4A10 - Embryo sectioned perpendicular to the anteroposterior axis. Panel 2 shows the anterior-most section.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: hindbrain |
Present |
Regionally restricted |
4A2
|
Expression was detected in neuroepithelium immediately lateral to the roof of the fourth ventricle.
|
Specimen
4A3:
embryonic day 12.0
(more )
Note: Specimens 4A2 through 4A10 - Embryo sectioned perpendicular to the anteroposterior axis. The section in panel 3 passes through the spinal cord at the top and through the metencephalon at the level of the rhombic lip.
Specimen
4A3:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 12.0
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Note:
|
Specimens 4A2 through 4A10 - Embryo sectioned perpendicular to the anteroposterior axis. The section in panel 3 passes through the spinal cord at the top and through the metencephalon at the level of the rhombic lip.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: spinal cord |
Present |
Regionally restricted |
4A3
|
Expression was detected in neuroepithelium immediately lateral to the roof of the fourth ventricle.
|
| TS20: rhombic lip |
Strong |
|
4A3
|
|
Specimen
4A4:
embryonic day 12.0
(more )
Note: Specimens 4A2 through 4A10 - Embryo sectioned perpendicular to the anteroposterior axis.
Specimen
4A4:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 12.0
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Note:
|
Specimens 4A2 through 4A10 - Embryo sectioned perpendicular to the anteroposterior axis.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: spinal cord |
Present |
Regionally restricted |
4A4
|
Expression was detected in a dorsal patch in a region lateral to the roof plate.
|
Specimen
4A5:
embryonic day 12.0
(more )
Note: Specimens 4A2 through 4A10 - Embryo sectioned perpendicular to the anteroposterior axis.
Specimen
4A5:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 12.0
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Note:
|
Specimens 4A2 through 4A10 - Embryo sectioned perpendicular to the anteroposterior axis.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: spinal cord |
Present |
Regionally restricted |
4A5
|
Expression was detected in a dorsal patch in a region lateral to the roof plate.
|
Specimen
4A6:
embryonic day 12.0
(more )
Note: Specimens 4A2 through 4A10 - Embryo sectioned perpendicular to the anteroposterior axis.
Specimen
4A6:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 12.0
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Note:
|
Specimens 4A2 through 4A10 - Embryo sectioned perpendicular to the anteroposterior axis.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: spinal cord |
Present |
Regionally restricted |
4A6
|
Expression was detected in a dorsal patch in a region lateral to the roof plate.
|
Specimen
4A7:
embryonic day 12.0
(more )
Note: Specimens 4A2 through 4A10 - Embryo sectioned perpendicular to the anteroposterior axis.
Specimen
4A7:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 12.0
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Note:
|
Specimens 4A2 through 4A10 - Embryo sectioned perpendicular to the anteroposterior axis.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: spinal cord |
Present |
Regionally restricted |
4A7
|
Expression was detected in a dorsal patch in a region lateral to the roof plate.
|
Specimen
4A8:
embryonic day 12.0
(more )
Note: Specimens 4A2 through 4A10 - Embryo sectioned perpendicular to the anteroposterior axis.
Specimen
4A8:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 12.0
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Note:
|
Specimens 4A2 through 4A10 - Embryo sectioned perpendicular to the anteroposterior axis.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: spinal cord |
Present |
Regionally restricted |
4A8
|
Expression was detected in a dorsal patch in a region lateral to the roof plate.
|
Specimen
4A9:
embryonic day 12.0
(more )
Note: Specimens 4A2 through 4A10 - Embryo sectioned perpendicular to the anteroposterior axis.
Specimen
4A9:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 12.0
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Note:
|
Specimens 4A2 through 4A10 - Embryo sectioned perpendicular to the anteroposterior axis.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: spinal cord |
Present |
Regionally restricted |
4A9
|
Expression was detected in a dorsal patch in a region lateral to the roof plate.
|
Specimen
4A10:
embryonic day 12.0
(more )
Note: Specimens 4A2 through 4A10 - Embryo sectioned perpendicular to the anteroposterior axis. Panel 10 shows the caudal region.
Specimen
4A10:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 12.0
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Note:
|
Specimens 4A2 through 4A10 - Embryo sectioned perpendicular to the anteroposterior axis. Panel 10 shows the caudal region.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: spinal cord |
Present |
Regionally restricted |
4A10
|
Expression was detected in a dorsal patch in a region lateral to the roof plate.
|
Specimen
4C1:
embryonic day 12.5
(more )
Note: Caudal spinal cord.
Specimen
4C1:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 12.5
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Note:
|
Caudal spinal cord.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: spinal cord |
Present |
Regionally restricted |
4C1
|
Expression was detected in a dorsal position in a region lateral to the roof plate. Compared to adjacent sections, there is a partial overlap of the expression pattern with Wnt1 and Lhx2 in the caudal region.
|
Specimen
4C4:
embryonic day 12.5
(more )
Note: Cervical spinal cord.
Specimen
4C4:
(close )
|
Genetic Background:
|
Not Specified
|
|
Age:
|
embryonic day 12.5
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Note:
|
Cervical spinal cord.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: spinal cord |
Present |
Regionally restricted |
4C4
|
Expression was detected in a dorsal position in a region lateral to the roof plate. Compared to adjacent sections, there is a partial overlap of the expression pattern with Wnt1, but not Lhx2, in the cervical region.
|
|
Analysis Tools