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Gene Expression Data
Assay Details
Assay
Reference: J:100595 van der Zwaag B, et al., Nucleotide variation analysis does not support a causal role for plexin-A1 in hereditary congenital facial paresis. Brain Res Dev Brain Res. 2005 Aug 8;158(1-2):66-71
Assay type: RNA in situ
MGI Accession ID: MGI:6407398
Gene symbol: Plxna1
Gene name: plexin A1
Probe: mPlexa1 cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 1A: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: dorsal root ganglion Strong 1A
TS17: neural tube Strong Regionally restricted 1A Higher levels of expression are observed in the ventral neural tube (the ventral rim).
TS17: forebrain Present Widespread 1A
TS17: hindbrain Present Widespread 1A
TS17: midbrain Present Widespread 1A

Specimen 1B: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: hindbrain Strong Non-Uniform 1B Strongly expressing cells are found in a medially positioned line in the lateral hindbrain, extending more caudally into the medulla oblongata.
TS20: medulla oblongata Strong Non-Uniform 1B Strongly expressing cells are found in a medially positioned line in the lateral hindbrain, extending more caudally into the medulla oblongata.
TS20: forebrain Present 1B
TS20: midbrain Present 1B
TS20: spinal cord Present 1B

Specimen 1C: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: hindbrain Strong Non-Uniform 1C Strongly expressing cells are observed near the floorplate.
TS20: forebrain Present 1C
TS20: midbrain Present 1C

Specimen 1D: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: hindbrain Present Non-Uniform 1D Higher levels of expression are seen in cells abutting the facial nucleus.
TS22: cerebellum Present 1D
TS22: hypothalamus Present 1D
TS22: medulla oblongata Present 1D
TS22: thalamus Present 1D

Specimen 1E: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: hindbrain Strong Non-Uniform 1E Strongly expressing cells are seen ventrally.
TS24: facial nucleus Present 1E A higher magnification is shown in the inlay.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory