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Gene Expression Data
Assay Details
Assay
Reference: J:126356 Ikeda K, et al., Six1 is essential for early neurogenesis in the development of olfactory epithelium. Dev Biol. 2007 Nov 1;311(1):53-68
Assay type: RNA in situ
MGI Accession ID: MGI:6378159
Gene symbol: Six1
Gene name: sine oculis-related homeobox 1
Probe: Six1 probe11
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 1A: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: olfactory placode Moderate 1A
TS15: nasal process mesenchyme Present Regionally restricted 1A Expression in mesenchyme underlying olfactory placode.
TS15: future forebrain Absent 1A

Specimen 1B: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: olfactory epithelium Strong 1B
TS17: nasal pit Present Regionally restricted 1B Expression is excluded from tip and rim of pit.
TS17: nasal process mesenchyme Present Regionally restricted 1B Expression in mesenchyme underlying olfactory epithelium.
TS17: forebrain Absent 1B

Specimen 1C: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: olfactory epithelium Present Widespread 1C
TS19: nasal epithelium Present Regionally restricted 1C Expression in epithelium of vomeronasal groove.
TS19: latero-nasal process mesenchyme Strong 1C
TS19: head mesenchyme Present Regionally restricted 1C Expression in head mesenchyme near forebrain.
TS19: forebrain Absent 1C

Specimen 1D: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: olfactory epithelium Present 1D
TS20: nasal cavity epithelium Present Regionally restricted 1D Weaker expression near orifice of epithelium compared with that in the olfactory epithelium.
TS20: latero-nasal process mesenchyme Strong 1D
TS20: head mesenchyme Present Regionally restricted 1D Expression in head mesenchyme near forebrain.
TS20: forebrain Absent 1D

Specimen 1E: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: olfactory epithelium Present Regionally restricted 1E Expression in apical compartment of olfactory epithelium, where proliferating sustentacular cells reside. Scattered pattern of expression in basal compartment, at site of proliferating olfactory receptor neuron progenitors. No expression in differentiated olfactory receptor neurons in middle compartment of olfactory epithelium.
TS22: nasal cavity lamina propria Strong Regionally restricted 1E Abundant expression in future lamina propria underlying the olfactory epithelium.
TS22: nasal septum cartilage Absent 1E No expression in cartilaginous tissue surrounding the olfactory epithelium, including the future nasal septum.
TS22: brain meninges Present Regionally restricted 1E Expression in meninges covering surface of developing olfactory bulb.
TS22: nasal cavity respiratory epithelium Weak 1E
TS22: forebrain Absent 1E
TS22: main olfactory bulb Absent 1E

Specimen 1F: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: olfactory epithelium Present Regionally restricted 1F Expression in apical compartment of olfactory epithelium. Sparce, scattered expression in basal compartment.
TS24: vomeronasal organ epithelium Present 1F
TS24: lateral nasal gland Present 1F

Specimen 10B WT: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: olfactory epithelium Present 10B Six1 WT Authors report similar levels of expression in wild type and Mash1-/- embryos.

Specimen 10B Mash1-/-: embryonic day 11.5; Ascl1tm1And/Ascl1tm1And (more )
Structure Level Pattern Image Note
TS19: olfactory epithelium Present 10B Six1 Mash1-/- Authors report similar levels of expression in wild type and Mash1-/- embryos.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory