Gene Expression Data
Assay Details
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Assay
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Reference:
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J:278361
Larsen BM, et al., Identification of an Intronic Regulatory Element Necessary for Tissue-Specific Expression of Foxn1 in Thymic Epithelial Cells. J Immunol. 2019 Aug 1;203(3):686-695
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:6363227
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Gene symbol:
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Foxn1
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Gene name:
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forkhead box N1
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Probe:
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Mm-Foxn1 (482021)
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Probe preparation:
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Antisense labelled with fluorescein RNA
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Visualized with:
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Fluorescein
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Results
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Specimen
5A +/+:
embryonic day 11.5
(more  )
Specimen
5A +/+:
(close  )
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Genetic Background:
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involves: C57BL/6NCr
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: foregut gland |
Present |
Regionally restricted |
5A1
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Expressed in embryonic thymus area.
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Specimen
5A deltaB/deltaB:
(close )
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Genetic Background:
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involves: C57BL/6NCr
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Mutant Allele(s):
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Rr107em2Abh/Rr107em2Abh
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: foregut gland |
Present |
Regionally restricted |
5A2
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Expressed in embryonic thymus area.
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Specimen
5A deltaC/deltaC:
(close )
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Genetic Background:
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involves: C57BL/6NCr
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Mutant Allele(s):
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Rr108em3Abh/Rr108em3Abh
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: foregut gland |
Present |
Regionally restricted |
5A3
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Expressed in embryonic thymus area.
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Specimen
5A deltaD/deltaD:
(close )
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Genetic Background:
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involves: C57BL/6NCr
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Mutant Allele(s):
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Rr109em4Abh/Rr109em4Abh
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: foregut gland |
Trace |
Regionally restricted |
5A4
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Expression was almost completely absent.
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Specimen
5A deltaE/deltaE:
(close )
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Genetic Background:
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involves: C57BL/6NCr
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Mutant Allele(s):
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Rr110em5Abh/Rr110em5Abh
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: foregut gland |
Present |
Regionally restricted |
5A5
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Expressed in embryonic thymus area.
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Specimen
5B +/+:
embryonic day 10.5
(more )
Specimen
5B +/+:
(close )
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Genetic Background:
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involves: C57BL/6NCr
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS17: foregut gland |
Present |
Regionally restricted |
5B left
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Expressed in embryonic thymus area.
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Specimen
5B deltaD/deltaD:
(close )
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Genetic Background:
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involves: C57BL/6NCr
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Mutant Allele(s):
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Rr109em4Abh/Rr109em4Abh
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
5C +/+:
embryonic day 16.5
(more )
Specimen
5C +/+:
(close )
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Genetic Background:
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involves: C57BL/6NCr
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Age:
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embryonic day 16.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS24: thymus |
Present |
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5C left
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Specimen
5C deltaD/deltaD:
(close )
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Genetic Background:
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involves: C57BL/6NCr
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Mutant Allele(s):
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Rr109em4Abh/Rr109em4Abh
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Age:
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embryonic day 16.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS24: thymus |
Absent |
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5C right
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The thymic buds were present but are greatly reduced in size, compared with the wild-type.
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Analysis Tools