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Gene Expression Data
Assay Details
Assay
Reference: J:264502 Ung DC, et al., Ptchd1 deficiency induces excitatory synaptic and cognitive dysfunctions in mouse. Mol Psychiatry. 2018 May;23(5):1356-1367
Assay type: RT-PCR
MGI Accession ID: MGI:6358579
Gene symbol: Ptchd1
Gene name: patched domain containing 1
Probe: Ptchd1-pE, Ptchd1-pF
Assay notes: Assay was quantitative RT-PCR showing expression levels relative to Gapdh. In some cases, the curator has assigned strengths based on relative levels shown in the graph.
Results
 Sample Information Bands Other Sample Information
Lane AgeStructure Size Not Specified Amount Genetic BackgroundMutant Allele(s)Sex
wt brain exons 1-2 Other lane(s) in blot use different probe(s)
wt brain exons 2-3 Other lane(s) in blot use different probe(s)
wt brain exons 1-3 P m 3-4 TS28: brain Present Not Specified Not Specified Not Specified
Ptchd1 -/y brain exons 1-2 Other lane(s) in blot use different probe(s)
Ptchd1 -/y brain exons 2-3 Other lane(s) in blot use different probe(s)
Ptchd1 -/y brain exons 1-3 P m 3-4 TS28: brain Weak (a) Not Specified C57BL/6N-Ptchd1tm1b(KOMP)IcsOrl/Ics Ptchd1tm1b(KOMP)IcsOrl/YNot Specified
Notes:
(a) Lower expression of exon 3 resulting from an alternative transcript lacking exon 2.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/07/2024
MGI 6.23 		The Jackson Laboratory