Gene Expression Data
Assay Details
Assay
|
Reference:
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J:266902
Rafipay A, et al., Expression analysis of limb element markers during mouse embryonic development. Dev Dyn. 2018 Nov;247(11):1217-1226
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:6342217
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Gene symbol:
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Scx
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Gene name:
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scleraxis scleraxis bHLH transcription factor
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Probe:
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Scleraxis probe6
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Visualized with:
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Alkaline phosphatase
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Results
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Specimen
2A:
embryonic day 12.5
(more )
Specimen
2A:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
2A':
embryonic day 12.5
(more )
Specimen
2A':
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
2B:
embryonic day 12.5
(more )
Specimen
2B:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
2B':
embryonic day 12.5
(more )
Specimen
2B':
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
2C:
embryonic day 13.5
(more )
Specimen
2C:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 13.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: hand |
Present |
Non-Uniform |
2C
|
Expression was detected in the handplate.
|
TS21: forelimb digit |
Present |
|
2C
|
Expression was detected in digit rays with thicker regions of expression at presumptive joint sites.
|
TS21: hand joint |
Present |
|
2C
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Expression domains at presumptive joint sites of the forelimb were wider compared to the hindlimb.
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Specimen
2C':
embryonic day 13.5
(more )
Specimen
2C':
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 13.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: hand |
Present |
Non-Uniform |
2C'
|
Expression was detected in the handplate.
|
TS21: forelimb digit |
Present |
|
2C'
|
Expression was detected in digit rays with thicker regions of expression at presumptive joint sites.
|
TS21: hand joint |
Present |
|
2C'
|
Expression domains at presumptive joint sites of the forelimb were wider compared to the hindlimb.
|
Specimen
2D:
embryonic day 13.5
(more )
Specimen
2D:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 13.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
2D':
embryonic day 13.5
(more )
Specimen
2D':
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 13.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
2E:
embryonic day 14.5
(more )
Specimen
2E:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: forelimb digit |
Present |
Regionally restricted |
2E
|
Distinct bands of expression were visible through the autopod and extending to the digit tips. Expression was strongest at regions of joint development, where attachment sites between connective tissue and the skeleton form.
|
TS22: hand |
Present |
Regionally restricted |
2E
|
Distinct bands of expression were visible through the autopod and extending to the digit tips. Expression was strongest at regions of joint development, where attachment sites between connective tissue and the skeleton form.
|
Specimen
2E':
embryonic day 14.5
(more )
Specimen
2E':
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: forelimb digit |
Present |
Regionally restricted |
2E'
|
Distinct bands of expression were visible through the autopod and extending to the digit tips. Expression was strongest at regions of joint development, where attachment sites between connective tissue and the skeleton form.
|
TS22: hand |
Present |
Regionally restricted |
2E'
|
Distinct bands of expression were visible through the autopod and extending to the digit tips. Expression was strongest at regions of joint development, where attachment sites between connective tissue and the skeleton form.
|
Specimen
2F:
embryonic day 14.5
(more )
Specimen
2F:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: foot |
Present |
Regionally restricted |
2F
|
Distinct bands of expression were visible through the autopod and extending to the digit tips. Expression was strongest at regions of joint development, where attachment sites between connective tissue and the skeleton form.
|
TS22: hindlimb digit |
Present |
Regionally restricted |
2F
|
Distinct bands of expression were visible through the autopod and extending to the digit tips. Expression was strongest at regions of joint development, where attachment sites between connective tissue and the skeleton form.
|
Specimen
2F':
embryonic day 14.5
(more )
Specimen
2F':
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: foot |
Present |
Regionally restricted |
2F'
|
Distinct bands of expression were visible through the autopod and extending to the digit tips. Expression was strongest at regions of joint development, where attachment sites between connective tissue and the skeleton form.
|
TS22: hindlimb digit |
Present |
Regionally restricted |
2F'
|
Distinct bands of expression were visible through the autopod and extending to the digit tips. Expression was strongest at regions of joint development, where attachment sites between connective tissue and the skeleton form.
|
Specimen
2G:
embryonic day 14.5
(more )
Specimen
2G:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: connective tissue |
Present |
Regionally restricted |
2G
|
Expression was detected in flexor tendons at the ventral side.
|
Specimen
2H:
embryonic day 15.5
(more )
Specimen
2H:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 15.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS23: forelimb digit |
Present |
Non-Uniform |
2K
,
2H
|
Expression in distinct bands extended along the digits, with strong areas of expression persisting around developing joint regions.
|
Specimen
2H':
embryonic day 15.5
(more )
Specimen
2H':
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 15.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS23: forelimb digit |
Present |
Non-Uniform |
2H'
,
2K'
|
Expression in distinct bands extended along the digits, with strong areas of expression persisting around developing joint regions.
|
Specimen
2I:
embryonic day 15.5
(more )
Specimen
2I:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 15.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS23: hindlimb digit |
Present |
Non-Uniform |
2L
,
2I
|
Expression in distinct bands extended along the digits, with strong areas of expression persisting around developing joint regions.
|
Specimen
2I':
embryonic day 15.5
(more )
Specimen
2I':
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 15.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS23: hindlimb digit |
Present |
Non-Uniform |
2L'
,
2I'
|
Expression in distinct bands extended along the digits, with strong areas of expression persisting around developing joint regions.
|
Specimen
2J:
embryonic day 15.5
(more )
Specimen
2J:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 15.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS23: connective tissue |
Present |
Regionally restricted |
2J
|
Expression was detected in flexor tendons at the ventral side.
|
|