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Gene Expression Data
Assay Details
Assay
Reference: J:28919 Connor F, et al., The Sry-related HMG box-containing gene Sox6 is expressed in the adult testis and developing nervous system of the mouse. Nucleic Acids Res. 1995 Sep 11;23(17):3365-72
Assay type: RNA in situ
MGI Accession ID: MGI:6303780
Gene symbol: Sox6
Gene name: SRY (sex determining region Y)-box 6
Probe: Sox6 cDNA10
Probe preparation: Antisense RNA
Results
Specimen 4A: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: central nervous system Present Graded 4A Expression was highest in the forebrain gradually decreasing in a rostrocaudal gradient to a region posterior to the forelimb bud, beyond which expression ceased. No dorsoventral gradient was visible.
TS15: otic pit Present 4A
TS15: embryo mesoderm Absent 4A
TS15: surface ectoderm Absent 4A

Specimen 4B: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: ventricular layer Present Regionally restricted 4B Expression was detected in the ventricular zone of the midbrain, hindbrain and upper spinal cord, diminishing posterior to the forelimb buds.
TS15: otic pit Present 4B

Specimen 4C: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: central nervous system Present Graded 4C Expression was highest in the forebrain gradually decreasing in a rostrocaudal gradient to a point in the upper cervical region. No dorsoventral gradient was visible.
TS17: ventricular layer Present Regionally restricted 4C Expression was detected in the ventricular zone of the brain and spinal cord.
TS17: otocyst Present 4C
TS17: embryo mesoderm Absent 4C
TS17: surface ectoderm Absent 4C

Specimen 4D: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: ventricular layer Present Regionally restricted 4D Expression was detected in the ventricular zone of the brain and spinal cord.
TS17: 4th ventricle Present 4D
TS17: hindbrain Present 4D
TS17: midbrain Present 4D
TS17: optic stalk Present 4D
TS17: otocyst Present 4D
TS17: telencephalon Present 4D
TS17: embryo mesoderm Absent 4D
TS17: surface ectoderm Absent 4D

Specimen not shown: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: brain Absent
TS20: spinal cord Weak


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory