About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:266589 Cohen-Tayar Y, et al., Pax6 regulation of Sox9 in the mouse retinal pigmented epithelium controls its timely differentiation and choroid vasculature development. Development. 2018 Aug 9;145(15):dev163691
Assay type: RNA in situ
MGI Accession ID: MGI:6293898
Gene symbol: Pax6
Gene name: paired box 6
Probe: Pax6 probe57
Probe preparation: labelled with Cy5 DNA
Assay notes: Single molecule fluorescence in situ hybridization (sm-FISH)
Results
Specimen 1C Proximal Control: embryonic day 13.5; Pax6tm2Pgr/Pax6tm2Pgr (more )
Note: Double labeled: green - Pax6; red - Sox9 (assay MGI:6293896).
Structure Level Pattern Image Note
TS21: pigmented retinal epithelium Present 1C Control Proximal There was a spatial dose-dependent inverse relationship between Pax6 and Sox9, with a significant negative correlation between the mRNA levels.
Specimen 1C Middle Control: embryonic day 13.5; Pax6tm2Pgr/Pax6tm2Pgr (more )
Note: Double labeled: green - Pax6; red - Sox9 (assay MGI:6293896).
Structure Level Pattern Image Note
TS21: pigmented retinal epithelium Present 1C Control Middle There was a spatial dose-dependent inverse relationship between Pax6 and Sox9, with a significant negative correlation between the mRNA levels.
Specimen 1C Distal Control: embryonic day 13.5; Pax6tm2Pgr/Pax6tm2Pgr (more )
Note: Double labeled: green - Pax6; red - Sox9 (assay MGI:6293896).
Structure Level Pattern Image Note
TS21: pigmented retinal epithelium Present 1C Control Distal There was a spatial dose-dependent inverse relationship between Pax6 and Sox9, with a significant negative correlation between the mRNA levels.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory