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Gene Expression Data
Assay Details
Assay
Reference: J:35345 Ema M, et al., Two new members of the murine Sim gene family are transcriptional repressors and show different expression patterns during mouse embryogenesis. Mol Cell Biol. 1996 Oct;16(10):5865-75
Assay type: RNA in situ
MGI Accession ID: MGI:6283513
Gene symbol: Sim1
Gene name: single-minded family bHLH transcription factor 1
Probe: mSim1 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 8A: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: embryo Absent 8A

Specimen 8B: embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS12: unsegmented mesenchyme Present 8B

Specimen 8C: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: unsegmented mesenchyme Present 8C

Specimen 8D: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: trunk unsegmented mesenchyme Present Uniform 8D

Specimen 8E: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: future midbrain Present Regionally restricted 8E Expressed in the ventrolateral regions of the rostral mesencephalon.
TS15: hindgut Present 8E
TS15: neural tube lateral wall Present Regionally restricted 8E Expressed in the ventrolateral region of the caudal neural tube.

Specimen 8F: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: future midbrain Present Regionally restricted 8F Expressed in the ventrolateral region but not in the ventral midline of the mesencephalon.

Specimen 8G: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: dermatome Present 8G
TS15: nephrogenic cord Present 8G
TS15: myotome Absent 8G
TS15: sclerotome Absent 8G
TS15: neural tube lateral wall Present Regionally restricted 8G Expressed in the ventrolateral region of the caudal neural tube.

Specimen 8H: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: diencephalon Present Regionally restricted 8H Expressed in the zona limitans intrathalamica.
TS17: forebrain-midbrain boundary region Present Regionally restricted 8H Expressed in the ventrolateral domain of the pretectum.
TS17: dermatome Present 8H
TS17: hindgut Present 8H
TS17: midbrain Present 8H
TS17: nephrogenic cord Present 8H
TS17: myotome Absent 8H
TS17: sclerotome Absent 8H
TS17: neural tube lateral wall Present Regionally restricted 8H Expressed in the ventrolateral region of the caudal neural tube.

Specimen 8I: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: midbrain Strong Regionally restricted 8I Expressed in the neuroephithelium of the ventrolateral portion of the mesencephalon.
TS17: diencephalon Present Regionally restricted 8I Expressed in the zona limitans intrathalamica.
TS17: forebrain-midbrain boundary region Present Regionally restricted 8I Expressed in the ventrolateral domain of the pretectum.

Specimen 8J: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: dermatome Present 8J
TS17: neural tube lateral wall Present Regionally restricted 8J Expressed in the ventrolateral domain of caudal neural tube between the floor plate and motor neurons.
TS17: myotome Absent 8J
TS17: sclerotome Absent 8J

Specimen 9A: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: diencephalon Present Regionally restricted 9A Expressed in the zona limitans intrathalamica, caudal diencephalon and the ventral thalamus. Within the regions in which Shh was expressed.
TS17: forebrain-midbrain boundary region Present Regionally restricted 9A Expressed in the ventrolateral domain of the pretectum.
TS17: midbrain Present Regionally restricted 9A Expressed in the ventrolateral side of the rostral mesencephalon. Within the regions in which Shh was expressed.

Specimen 9D: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: diencephalon Present Regionally restricted 9D Expressed in the zona limitans intrathalamica. Within the regions in which Shh was expressed.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory