About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:174477 Abellan A, et al., Differential expression of LIM-homeodomain factors in Cajal-Retzius cells of primates, rodents, and birds. Cereb Cortex. 2010 Aug;20(8):1788-98
Assay type: RNA in situ
MGI Accession ID: MGI:6281667
Gene symbol: Lhx9
Gene name: LIM homeobox protein 9
Probe: Lhx9 cDNA4
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 2G: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: neocortex Present Regionally restricted 2G Restricted expression in the developing pallium, being expressed in specific layers of the medial, dorsal, and ventral pallium.
Specimen 2H: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: neocortex Present Regionally restricted 2H Restricted expression in the developing pallium, being expressed in specific layers of the medial, dorsal, and ventral pallium.
Specimen 2I: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: neocortex Present Regionally restricted 2I Restricted expression in the developing pallium, being expressed in specific layers of the medial, dorsal, and ventral pallium. Not expressed in the cortical hem.
Specimen 2J/J": embryonic day 11.5 (more )
Note: Double labeled: blue - Lhx9; green - Reln (assay MGI:6281681).
Structure Level Pattern Image Note
TS19: telencephalon marginal layer Weak 2J" , 2J A possible but faint coexpression in Reelin-positive cells.
Specimen 2K/K": embryonic day 13.5 (more )
Note: Double labeled: blue - Lhx9; green - Reln (assay MGI:6281681).
Structure Level Pattern Image Note
TS21: cerebral cortex marginal layer Absent 2K" , 2K
TS21: cortical plate Present 2K , 2K"
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory