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Gene Expression Data
Assay Details
Assay
Reference: J:26895 Avantaggiato V, et al., Developmental analysis of murine Promyelocyte Leukemia Zinc Finger (PLZF) gene expression: implications for the neuromeric model of the forebrain organization. J Neurosci. 1995 Jul;15(7 Pt 1):4927-42
Assay type: RNA in situ
MGI Accession ID: MGI:6269362
Gene symbol: Otx1
Gene name: orthodenticle homeobox 1
Probe: Otx1 cDNA3
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Assay notes: Probes were hydrolyzed by alkaline hydrolysis to an average length of 150 nucleotides.
Results
Specimen 9a: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: forebrain-midbrain boundary region Present Regionally restricted 9a Expression is in the anterior and posterior pretectal area.
TS20: diencephalon Present Regionally restricted 9a Expression is in a narrow stripe running between the mammillary region, the ventral thalamus, the hypothalamic cell cord, the entopeduncular area, and the dorsal tuberal area.
Specimen 9e: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: diencephalon Present 9e
Specimen 9i: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: thalamus Present Regionally restricted 9i Expression is in the internal germinal layer.
Specimen not shown: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: epithalamus Present Regionally restricted Expression is in the germinal layer.
TS20: thalamus Present Regionally restricted Expression is in the germinal layer of the dorsal thalamus.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/18/2025
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