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Gene Expression Data
Assay Details
Assay
Reference: J:260421 Mesman S, et al., Expression analyzes of early factors in midbrain differentiation programs. Gene Expr Patterns. 2018 Jan;27:8-15
Assay type: RNA in situ
MGI Accession ID: MGI:6258335
Gene symbol: Enc1
Gene name: ectodermal-neural cortex 1
Probe: Enc1 probe1
Probe preparation: labelled with digoxigenin
Visualized with: Alkaline phosphatase
Results
Specimen 7A E11.5 Lateral: embryonic day 11.5 (more )
Note: Double labeled: blue - Enc1; brown - Th (assay MGI:6258336).
Structure Level Pattern Image Note
TS19: midbrain Present 7A E11.5 Lateral Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5
TS19: prosomere 1 Present 7A E11.5 Lateral Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5
TS19: prosomere 2 Present 7A E11.5 Lateral Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5
TS19: prosomere 3 Present 7A E11.5 Lateral Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5

Specimen 7A E11.5 Medial: embryonic day 11.5 (more )
Note: Double labeled: blue - Enc1; brown - Th (assay MGI:6258336).
Structure Level Pattern Image Note
TS19: midbrain Present 7A E11.5 Medial Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5
TS19: prosomere 1 Present 7A E11.5 Medial Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5
TS19: prosomere 2 Present 7A E11.5 Medial Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5
TS19: prosomere 3 Present 7A E11.5 Medial Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5

Specimen 7A E12.5 Lateral: embryonic day 12.5 (more )
Note: Double labeled: blue - Enc1; brown - Th (assay MGI:6258336).
Structure Level Pattern Image Note
TS20: midbrain Present 7A E12.5 Lateral Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5
TS20: prosomere 1 Present 7A E12.5 Lateral Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5
TS20: prosomere 2 Present 7A E12.5 Lateral Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5
TS20: prosomere 3 Present 7A E12.5 Lateral Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5

Specimen 7A E12.5 Medial: embryonic day 12.5 (more )
Note: Double labeled: blue - Enc1; brown - Th (assay MGI:6258336).
Structure Level Pattern Image Note
TS20: midbrain Present 7A E12.5 Medial Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5
TS20: prosomere 1 Present 7A E12.5 Medial Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5
TS20: prosomere 2 Present 7A E12.5 Medial Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5
TS20: prosomere 3 Present 7A E12.5 Medial Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5

Specimen 7A1: embryonic day 12.5 (more )
Note: Double labeled: blue - Enc1; brown - Th (assay MGI:6258336).
Structure Level Pattern Image Note
TS20: prosomere 2 Present Regionally restricted 7A1 Specific expression overlaps with rostrally located group of Th-expressing neurons in prosomere 2-3 area.
TS20: prosomere 3 Present Regionally restricted 7A1 Specific expression overlaps with rostrally located group of Th-expressing neurons in prosomere 2-3 area.

Specimen 7A E14.5 Lateral: embryonic day 14.5 (more )
Note: Double labeled: blue - Enc1; brown - Th (assay MGI:6258336).
Structure Level Pattern Image Note
TS22: midbrain Present 7A E14.5 Lateral Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5
TS22: prosomere 1 Present 7A E14.5 Lateral Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5
TS22: prosomere 2 Present 7A E14.5 Lateral Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5
TS22: prosomere 3 Present 7A E14.5 Lateral Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5

Specimen 7A E14.5 Medial: embryonic day 14.5 (more )
Note: Double labeled: blue - Enc1; brown - Th (assay MGI:6258336).
Structure Level Pattern Image Note
TS22: midbrain Present 7A E14.5 Medial Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5
TS22: prosomere 1 Present 7A E14.5 Medial Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5
TS22: prosomere 2 Present 7A E14.5 Medial Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5
TS22: prosomere 3 Present 7A E14.5 Medial Expression throughout midbrain area to prosomere 3 area from E11.5 to E14.5

Specimen 7A2: embryonic day 14.5 (more )
Note: Double labeled: blue - Enc1; brown - Th (assay MGI:6258336).
Structure Level Pattern Image Note
TS22: midbrain Present Regionally restricted 7A2 Expression overlaps with rostrally located group of Th-expressing neurons.

Specimen 7B E11.5 Rostral: embryonic day 11.5 (more )
Note: Double labeled: blue - Enc1; brown - Th (assay MGI:6258336).
Structure Level Pattern Image Note
TS19: midbrain floor plate Present Regionally restricted 7B E11.5 Rostral Specific expression in subventricular zone of floor plate and basal plate of midbrain.

Specimen 7B E11.5 Caudal: embryonic day 11.5 (more )
Note: Double labeled: blue - Enc1; brown - Th (assay MGI:6258336).
Structure Level Pattern Image Note
TS19: midbrain mantle layer Present Regionally restricted 7B E11.5 Caudal Specific expression in subventricular zone of floor plate and basal plate of midbrain.

Specimen 7B E12.5 Rostral: embryonic day 12.5 (more )
Note: Double labeled: blue - Enc1; brown - Th (assay MGI:6258336).
Structure Level Pattern Image Note
TS20: midbrain floor plate Present Regionally restricted 7B E12.5 Rostral Specific expression in subventricular zone of floor plate and basal plate of midbrain.

Specimen 7B E12.5 Caudal: embryonic day 12.5 (more )
Note: Double labeled: blue - Enc1; brown - Th (assay MGI:6258336).
Structure Level Pattern Image Note
TS20: midbrain mantle layer Present Regionally restricted 7B E12.5 Caudal Specific expression in subventricular zone of floor plate and basal plate of midbrain.

Specimen 7B1: embryonic day 12.5 (more )
Note: Double labeled: blue - Enc1; brown - Th (assay MGI:6258336).
Structure Level Pattern Image Note
TS20: midbrain Present Regionally restricted 7B1 Expression overlaps with rostrally located Th-expressing neurons.

Specimen 7B E14.5 Rostral: embryonic day 14.5 (more )
Note: Double labeled: blue - Enc1; brown - Th (assay MGI:6258336).
Structure Level Pattern Image Note
TS22: midbrain floor plate Present Regionally restricted 7B E14.5 Rostral Specific expression in subventricular zone of floor plate and basal plate of midbrain.

Specimen 7B E14.5 Caudal: embryonic day 14.5 (more )
Note: Double labeled: blue - Enc1; brown - Th (assay MGI:6258336).
Structure Level Pattern Image Note
TS22: midbrain mantle layer Present Regionally restricted 7B E14.5 Caudal Specific expression in subventricular zone of floor plate and basal plate of midbrain.

Specimen 7B2: embryonic day 14.5 (more )
Note: Double labeled: blue - Enc1; brown - Th (assay MGI:6258336).
Structure Level Pattern Image Note
TS22: midbrain mantle layer Present Regionally restricted 7B2 Expression in some Th-expressing neurons in subventricular zone.

Specimen 7B Adult: postnatal adult (more )
Note: Double labeled: blue - Enc1; brown - Th (assay MGI:6258336).
Structure Level Pattern Image Note
TS28: substantia nigra Weak Regionally restricted 7B Adult Expression in part of Th-expressing neurons of substantia nigra.

Specimen 7B3: postnatal adult (more )
Note: Double labeled: blue - Enc1; brown - Th (assay MGI:6258336).
Structure Level Pattern Image Note
TS28: substantia nigra Weak Regionally restricted 7B3 Expression in part of Th-expressing neurons of substantia nigra.


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory